Ddem002795.1
Basic Information
- Insect
- Drosophila demipolita
- Gene Symbol
- -
- Assembly
- GCA_035042405.1
- Location
- JAWNLI010000033.1:5320790-5327095[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.1e-09 8.7e-06 25.3 0.0 16 40 601 627 597 630 0.84 2 4 6.9e-14 9.8e-11 41.1 0.1 2 39 642 679 641 682 0.94 3 4 1.6e-17 2.3e-14 52.8 0.0 1 45 696 741 696 741 0.98 4 4 1.6e-19 2.3e-16 59.1 0.0 1 43 748 791 748 792 0.97
Sequence Information
- Coding Sequence
- ATGGGTCTGCTGCGCACCGCGgaacaattgaaaatcaaaGGTCTTTGCGAGCCGGCTGAGAATGCGGATGACTTAAATGACGCGGCTTTGGCGACAATAACCGTATCGGAGAACATACAGCAGGCGGTTGTTGGCAACATTGTGAATGCGAGCATAGTGCCCGGTGCGCCCTCGCCCACGatcgaacagcagcagcatcatcaacagcaacatcagcagcaacagcagcagcagcagcagcagcaacatcagcaggagcatcagcagcagcagcagcaggtgcaacaacagcagctggtcAACAGTGCTTTGCTGACACAGCATACGCTTGCAACAAACAGTGGCATACAATTGGCCAACGCTGCTGGACAACAGCTGCTGAGCAATACAagcggcagcagtagcagtctgcaacagttgcagcaacagcagcagcagcagcagcaacagttgcagccaaCGTTGCGTAAATCTCGTGTCCGCAAACGCTCGAAATCGCCAGATTTACAACTGGGTGGCAACGCCATtgtacaacaaccacagccggctcaccatcagcagcaacagcagcagcaacataaccaacaacaacagcaacaacatcaacaacaacaacagcaacatcatcatccgCAAACGATACTCATCCAGGGACAGAATCAAACATCGATTGTGAGTCTACAGCAGACGGCAGACGGCAATTATATACCGGTTGGATCAGCTGGCGACGACTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCATCGGGCGTGAGCAGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgaCTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCAGCCACACCAGTCACCGTTACGGAACATGTCGATCTCTCGTGCAACCCCAGCACAGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATTCAACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAGGTGATTGAAGCCAAACACTTGGCCCATGTGcaagcgcaacagcagcagcagcaacaacagcagcagcaacaacaacagcagcaacaacagcagcaacagcagcaacaacaacagcagcaacatgcacatcatcatcatcagttgCACGCTCAGCAACTGTTGGCTcagagtcagcagcagcagcagcagcaacagcagcagcaacaacagcagcagcaacaccaacagcagcagcaacaggcagcgGTGCATGCCGCACAGCATGCAGCGCATGCCACGCATACGGAAATTAGCGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATTAAGAATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGACTGGGTGGCAGCGTTTGCGGGCCCAGCGtcggtggtgttggtggtggtggtggtggcggcattggtggtggtggtggtgctggcgaGAAAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGAGCACATCGTCTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCATTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATTGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAACACTTCTGTGCAAAAAGCAAGTGCCGAATTTGGCATACCGACAGGAACTCTTTATGGACGCTGCAAACGGGAGGGCATCGAACTATCGCGTTCGAATCCAACGCCCTGGTCTGAGGATGCTATGAACGAGGCATTGAACTCAGTGCGCGTTGGTCAAATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGACGATTCAAACGTGGCAAGTACGATGTGGTGGCCAATACCAGTGGCGTCTCGCTGAACAACACCTCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagtttCCGTACAGTCCGTCGCCACATCCGCCGACGCCACAGCATCATAGTACGCCGCTGCATCACAGTTCGCAGCAGGGTCCGCCGACGCCGCAGCATATGCAACAGCATGTGGtgcacatgcaacagcagtCGCCACACCAGGCGcaccatcaacagcagcagcagcagcaacagcagcagcacatgcaacagcaacaggatgTGGTCACATCAAGCAGCCAAGTGGTGCatagccagcaacagcagcttcaGCAGATCTATCAGCATCACGGCACGCCCGAGCGCAGTTGA
- Protein Sequence
- MGLLRTAEQLKIKGLCEPAENADDLNDAALATITVSENIQQAVVGNIVNASIVPGAPSPTIEQQQHHQQQHQQQQQQQQQQQHQQEHQQQQQQVQQQQLVNSALLTQHTLATNSGIQLANAAGQQLLSNTSGSSSSLQQLQQQQQQQQQQLQPTLRKSRVRKRSKSPDLQLGGNAIVQQPQPAHHQQQQQQQHNQQQQQQHQQQQQQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVGSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNASGVSSQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHSTGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHHQLHAQQLLAQSQQQQQQQQQQQQQQQQHQQQQQQAAVHAAQHAAHATHTEISGATVMEIDPSQIKNEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPSVGGVGGGGGGGIGGGGGAGEKDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPLHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQQQHMQQQQDVVTSSSQVVHSQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512640;
- 90% Identity
- iTF_00500226;
- 80% Identity
- -