Dpeg002598.4
Basic Information
- Insect
- Drosophila pegasa
- Gene Symbol
- -
- Assembly
- GCA_035046225.1
- Location
- JAWNOD010000076.1:7733696-7741566[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5e-11 5.8e-08 32.2 0.0 1 40 593 633 593 636 0.90 2 4 8.2e-14 9.6e-11 41.1 0.1 2 39 648 685 647 688 0.94 3 4 1.9e-17 2.2e-14 52.7 0.0 1 45 702 747 702 747 0.98 4 4 1.9e-19 2.3e-16 59.1 0.0 1 43 754 797 754 798 0.97
Sequence Information
- Coding Sequence
- atgtTCCAGGGTCTGTTGCGCACCGCGGAGCAGCTGAAAATCAAGGGGCTGTGCGAGCCGGCCGAGAATGCGGACGATCTGAATGACGCTGCGTCGGCGATAATCACCGTGTCGGAGAACATTCAGCAGGCGGTCGTTGGCAACATTGTGAATGCGAGTCTGGTGTCTGGAGCGCCCTCGCCCacactcgagcagcagcagcagcagcagcaccatcagcagcagcagcagcagcaacagcagcagcagcagcagcagcaggagcatcagcagcaacagcaattggtgAATAGCGCGCTGCTGGCACAGCATACGCTTGCCACCAGCAGTGGCATACAGTTGGCGgccgggcagcagctgctgagcaacacaggcggcaacagcagcagcagcagcagcagcctgcagcagttgcagcagcagcagcagcagcagcaacagttgcagccgACGCCGCGTAAATCGCGACTGCGTAAACGCTCCAAATCGCCCGACTTGCAACTGCAAACACAGcagtcacagcagcaacagcaacagcagcagcaacatcatcatcatccgcAAACGATACTCATCCAGGGACAGAATCAAACGTCGATCGTGAGTCTGCAGCAGACGGCCGACGGCAACTACATCCCGGTGGCAACCACCGGCGACGACTCGGACTGCGATAACAAGCCGCAGAAGATCTGCAAGACAGAGCAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACGTCGAATAATGCTGCCGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAatcccACCGAACCGCTCGACATAGACAATCATTTGGCTCAACAAATCCATCGGCTCGATCAATCTCCCATGCATTCTATAGCGCATCATCACGCCACCGGCGACGAGAGCAACTCCAATCTGGTGCAGCACATCAAGAGCGAGGTAATCGAGGCCAAGCATCTGGCTCACGtgcaagcgcagcagcagcagcaggcgcagcagcagcagcagcaggcgcagcagcagcagcaacagcaacaacagcagcagcaacagcagcagcagcaacaacagcaacacgcagcacatcatcatcagcatttgCACGCGCAGCAATTGCTAGCTcagagtcagcagcagcagcagcaggcgcagcagcagcagcatcagcagcagcagcagcatcagcagcagcagcaggcggcggtgCATGCGGCACAGCATGGATCACATGCCACGCATGCGGAGATTGGTGGTGCTACTGTTATGGAGATTGATCCGAGCCAGATCAAGCACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCACATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgttggtggtggcggtggtggtggtggtggtggtggcggcattggtggtggtggtgttaaTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCAACGACCTTGTGGCAGCGCGCTCACCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGACGCCCTACAGAACGCCTTGGAGGCGCTGCGCTCGGGTCAAATATCGGCGAATAAAGCGTCCAAAGCGTTTGGCATACCTTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGCATTCGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCGGAGGATCTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCCGTGCAGAAAGCGAGCGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCTATGAACGAGGCGCTGAACTCGGTGCGCGTCGGTCAAATGTCCATCAATCAGGCGGCAATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGGGGCAAGTACGACGTGGTGGCCAACACGAGTGGCATCTCCCTTAACAACACGTCCGGCAACACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAACTCGCATCAGTTCCCGTACAGCCCGTCGCCGCACGCGCAGACGCCGCAGCATCATGGCACGCCGCAGCATCACGGCACGCCGCTGCACCACAGCACGCCGCACCACAGCTCGCAGCAGGGACCGCCGACGCCGCAgggcatgcagcagcagcagcacgtggtgcacatgcagcagcagcagtcgccgcaCCAGGcgcaccatcagcagcagcagcagcacatgcaGCAGGATGTCGTCACGTCGAGCAGCCAAGTGGTgcacagccaacagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcaacagttgcagcagatCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MFQGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQQAVVGNIVNASLVSGAPSPTLEQQQQQQHHQQQQQQQQQQQQQQQEHQQQQQLVNSALLAQHTLATSSGIQLAAGQQLLSNTGGNSSSSSSSLQQLQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLQTQQSQQQQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVATTGDDSDCDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQAQQQQQQAQQQQQQQQQQQQQQQQQQQQHAAHHHQHLHAQQLLAQSQQQQQQAQQQQHQQQQQHQQQQQAAVHAAQHGSHATHAEIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGGGGGIGGGGVNAGEKGQFNGPKAWTQDDMNSALDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLNNTSGNTTGSIEIIEHSQENSHQFPYSPSPHAQTPQHHGTPQHHGTPLHHSTPHHSSQQGPPTPQGMQQQQHVVHMQQQQSPHQAHHQQQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512640;
- 90% Identity
- iTF_00479563;
- 80% Identity
- -