Dham004687.2
Basic Information
- Insect
- Drosophila hamatofila
- Gene Symbol
- -
- Assembly
- GCA_035045345.1
- Location
- JAWNPA010000012.1:21670936-21678795[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.4e-09 1.6e-05 24.7 0.0 17 40 604 628 599 631 0.85 2 4 6.5e-14 1.2e-10 41.1 0.1 2 39 643 680 642 683 0.94 3 4 1.5e-17 2.8e-14 52.7 0.0 1 45 697 742 697 742 0.98 4 4 1.5e-19 2.8e-16 59.1 0.0 1 43 749 792 749 793 0.97
Sequence Information
- Coding Sequence
- ATGGGCGTGGCTAGTTTTAGGCGACACTTTGAGGGTCTGTTGCGCACCGCGGagcaattgaaaatcaaaggACTGTGCGAGCCGGCCGAGAACGCGGACGATTTGAATGACGCTGCATCGGCGATAATCACTGTATCGGAGAACATACAGCAGGCGGTCGTTGGCAATATTGTGAATGCGAGTCTAGTGTCTGGTGCTCCGTCGCCCACactcgagcagcagcatcatcaacagcagcagcaacaacaacagcagcagcagcaacaacagcaacaacagcagcagcagcagcagcaacaacaggagcaccagcagcaggtgcatcagcagcagcagcagcagttggtgAATAGTGCGCTGCTGGCACAGCATACGCTTGCAACCAGCAGTGGCATACAGTTGGCGGCCGGGCAACAGCTGTTGAGCAATAcaggcggcaacagcagcagcagcagcagtagcctgcaacagttgcagcagcagcagcaacagcagcaacagcagcagcagcaacagttgcagccaaCGCCGCGTAAATCGCGACTGCGTAAACGCTCCAAATCACCAgatttgcaattgcaaacacaatcgcaacagcagcagcagcagcagcaacatcatcatcatccacaAACGATACTCATCCAGGGCCAGAATCAAACATCGATCGTGAGTCTGCAGCAAACGGCCGACGGCAATTATATACCAGTTGCAACAACTGGCGACGACTCCGATTGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGAcggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAatCCCACCGAACAGCTCGACATAGACAATCACTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCACCATCATGCCACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAGAGCGAGGTAATCGAGGCCAAGCATCTGGCTCATGtgcaggcgcagcagcagcagcagcagcaacagcagcagcagcaacaacagcagcaacagcagcagcagcaacaacaacaacagcagcaacatgcagcacatcatcatcaacatttGCACGCTCAGCAATTGTTGGCGCAaagtcagcagcaacagcagcagcagcagcaacaacagcagcagcagcaacagcaacaacagcaacatcaacagcagcaggcggcggTGCATGCAGCACAGCATGCAGCGCATGCCACGCATGCGGATATTGGTGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgttggtggtggtggtggcggcattggtggtggtggtgctaaTGCTGGCGAGAAAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCGTGGAATGAGGATGCGTTGCAGAATGCCTTGGAGGCATTGCGTTCCGGGCAAATATCGGCTAATAAAGCATCCAAGGCGTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCTGGCAATACGTCTGTACAGAAAGCAAGTGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCTATGAACGAGGCATTGAACTCGGTGCGCGTCGGTCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAGTACGATGTGGTGGCCAATACAAGTGGCATCTCCCTTAACAACACGTCCGGCAATACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCATCAGTTCCCGTACAGTCCGTCGCCGCATGCGCAGACGCCGCAGCACCATGGAACGCCGCAGCATCATGGCACGCCGCTGCATCACAGTACGCCGCATCACAGTTCGCAGCAGGGACCGCCGACGCCGCAGGGCATGCAACAGCATGTGGTGCACATGCAACAGTCGCCGCATCAGgcgcatcatcagcagcagcagcagcagcagcagcacatgcAACAGGATGTGGTCACATCGAGCAGCCAGGTGGTgcacagccaacagcagcagcaacagcagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcagttgcagcagatCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MGVASFRRHFEGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQQAVVGNIVNASLVSGAPSPTLEQQHHQQQQQQQQQQQQQQQQQQQQQQQQQEHQQQVHQQQQQQLVNSALLAQHTLATSSGIQLAAGQQLLSNTGGNSSSSSSSLQQLQQQQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLQTQSQQQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVATTGDDSDCDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEQLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQHAAHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQQQQQQHQQQQAAVHAAQHAAHATHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGIGGGGANAGEKDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLNNTSGNTTGSIEIIEHSQENSLHMLQHQFPYSPSPHAQTPQHHGTPQHHGTPLHHSTPHHSSQQGPPTPQGMQQHVVHMQQSPHQAHHQQQQQQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512640;
- 90% Identity
- iTF_00479563;
- 80% Identity
- -