Zbog004558.2
Basic Information
- Insect
- Zaprionus bogoriensis
- Gene Symbol
- -
- Assembly
- GCA_035046045.1
- Location
- JAWNOI010000066.1:1098820-1112534[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.1e-10 8e-07 28.5 0.0 7 40 604 638 603 641 0.87 2 4 1.1e-13 1.2e-10 40.7 0.1 2 39 653 690 652 693 0.94 3 4 1.9e-17 2.1e-14 52.7 0.0 1 45 707 752 707 752 0.98 4 4 1.2e-19 1.4e-16 59.8 0.0 1 43 759 802 759 804 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCCGCTGCCCATTTGCCAACTGGGCTGGTCTGTTACGCACCGCGgaacaattgaaaatcaagGGACTCTGCGAGCCTGCCGAGAATGCGGACGATCTGAATGACGCTGCGTCGGCGACGATAACCGTATCGGAGAACATACAGCAGGCGGTGGTTGGCAACATTGTGAACGCGAGTCTAGTGCCAGGTGCGCCCTCGCCCacgctcgagcagcagcagcaacagcagcagcagcagcaggcgcagcagcagcatcatcagcaacagcagcaagcgcagcagcagcaggagcatcagcaggtgcagcagcaacagcagctggttAACAGTGCGCTGCTCGCTCAGCACAGTCTTGCAACAAACAGTGGCATACAGTTGGCCAATGCGGCTGGGCAACAGCTGTTGAGCAACACAGCcactggcagcaacagcagcagcagcttgcaacagttgcagcagcagcagcagcaacaacaattgcagccaACGCCGCGTAAAACGCGACTGCGTAAACGCTCTAAATCACCAGATTTACAATTAGCGAGcggacaacaaccacagccgGCACatcaccaacagcagcagcagcagcagcaacaacagcagcagcaacagcaacagcagcagcagcagcaacaacatcatcatcatcatcagccaCAAACGATAGTCATTCAGGGACAGAATCAGACATCGATCGTGAGTCTACAGCAGACAGCTGACGGCAATTATATACCCGTCACATCTGGCGACGATTCCGATAGCGATAACAAACCGCAAAAGATCTGCAAAACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCCGCTGCGGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCACACGACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAAGTGATTGAGGCCAAGCACTTGGCGCATGTGCaggcccaacagcagcagcagcaacagcagcagcaacaacaacagcagcaacaacagcagcaacaacaacaacaacagcagcagcagcaacatgcacatcatcatcagcatttGCACGCACAGCAATTGTTGGCGCaaagtcagcagcagcagcagcaacaacaacagcagcaacaacagcagcagcatcaacagcagcaggcagcggtgCATGCAGCACATGCAGCACATGCCACGCATGCGGAAATCAGTGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCACGAGCCTGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGATATGTACAACTCGGACACGAGCGAGGATTCGATGATGATCGCCAATGGTTCGCCGCACGATCAAAATGAACCGCACTATACGAATTTGGATCAGCAGCACGGCGGCCTTGGTGGCAGTGTTTGTGGCCCCGGCGCcggtggtgttggtggtggtggcggtggcggcattggtagtggtggtggtggtaatGCTGGCGAGAAAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCGACAACATTATGGCAACGTGCACACCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAATCCTGGAACGAGGATGCCCTGCAGAGCGCTCTGGAGGCATTGCGTTCGGGTCAGATATCGGCTAACAAAGCATCGAAAGCCTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCGTTCAATGCCGCACCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCTGTGCAAAAGGCGAGTGCCGAGTTTGGCATACCCACAGGAACACTCTATGGACGCTGCAAACGGGAGGGCATCGAGCTGTCGCGCTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGGCGCTTCAAGCGCGGCAAATACGACGTGGCCAACGTCAGCGGCGTCTCGTTGCTCAACGCCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAACTCGTTGCatatgttgcagcaacagttcCCGTACAGCCCGTCGCCGCATCCGCCGACGCCGCAGCATCACAGCACGCCGCAGCATCACAGTTCGCAGCAAGggccgccgacgccgcagcatatgcagcagcatgtggtgcacatgcagcagcagcagcagtcgccgcatCAGGcccaccatcagcagcagcagcacatgcaACAGGATGTGGTAACATCGAGCAGCCAAGTGGTGCatagccaacagcagcagcagcagcagcagcaacagcagcagcaacaacaacagcaacagcagcagcagcagcttcagcagaTTTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MPGRCPFANWAGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPGAPSPTLEQQQQQQQQQQAQQQHHQQQQQAQQQQEHQQVQQQQQLVNSALLAQHSLATNSGIQLANAAGQQLLSNTATGSNSSSSLQQLQQQQQQQQLQPTPRKTRLRKRSKSPDLQLASGQQPQPAHHQQQQQQQQQQQQQQQQQQQQQQHHHHHQPQTIVIQGQNQTSIVSLQQTADGNYIPVTSGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAAGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQHQQQQAAVHAAHAAHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGIGSGGGGNAGEKALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANVSGVSLLNASGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQQQSPHQAHHQQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512640;
- 90% Identity
- iTF_00519079;
- 80% Identity
- -