Basic Information

Insect: Drosophila hydei
Gene Symbol: br
Assembly: GCA_003285905.2
Location: NW:2161094-2224626[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.8e-11 5.2e-08 32.0 0.0 1 40 691 731 691 734 0.90

2 4 4.6e-14 8.5e-11 40.9 0.1 2 39 746 783 745 786 0.94

3 4 1.1e-17 2e-14 52.6 0.0 1 45 800 845 800 845 0.98

4 4 1.1e-19 2e-16 58.9 0.0 1 43 852 895 852 896 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.8e-11	5.2e-08	32.0	0.0	1	40	691	731	691	734	0.90
2	4	4.6e-14	8.5e-11	40.9	0.1	2	39	746	783	745	786	0.94
3	4	1.1e-17	2e-14	52.6	0.0	1	45	800	845	800	845	0.98
4	4	1.1e-19	2e-16	58.9	0.0	1	43	852	895	852	896	0.97

Sequence Information

Coding Sequence: atggcTGCCGTGCGGGGACATCAGTACTTTAGTCTGCGCTGGAATAACTATCAGAACACGATGACGTCAGTGTTTCAGCAACTGCGCGAGGATCTCTCCTTTGTCGATGTGACCTTGTCCTGTGAGCACGGCTCGCTCAAGGCGCACAAGGTTGTCTTATCCGCCTGCTCAACGTATTTCCAAAAGCTCCTGCTCGAGAATCCGTGCAAGCATCCAACGATTATCTTACCCGCCGACATCATCTTCACAGATCTGAAAACAATTATCGATTTTGTGTATCGCGGCGAAATCGATGTTACCGAATCGGACCTACAGGGTCTGTTGCGCACCGCGGAGCAGTTGAAAATCAAAGGACTGTGCGAGCCGGCCGAGAACGCGGACGACTTGAATGACGCTGCGTCGGCGATAATCACTGTGTCGGAGAACATACAGCAGGCGGTCGTTGGGAATATTGTGAATGCGAGTCTGGTGTCCGGTGCTCCGTCACCCACActcgagcagcagcaccatcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcaacaggagcatcagcagcaggtgcaacagcagcagttggtgAACAGTGCGCTGCTAGCACAGCATACGCTTGCAACAAACAGTGGCATACAGTTGGCGGCAGGGCAACAGTTGCTGAGCACTAcaggcggcaacagcagcagcagcagcagcagcttgcaacagttgcagcagcaacagttacAGCCAACGCCGCGTAAATCGCGACTGCGAAAACGTTCCAAGTCGCCAGATTTGCAACTGCAAACACAgtcgcaacaacagcagcagcagcagcagcaacagcaacagcagcagcaacagcaacagcagcagcaacagcagcaacatcatcatcatccacaAACGATACTCATTCAGGGACAGAATCAAACATCGATCGTGAGTCTGCAGCAAACGGCCGACGGCAATTATATACCAGTTGCAACAACTGGCGACGACTCCGATTGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGACACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATTCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATGCCACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAGAGCGAGGTAATCGAGGCCAAGCATCTGGCTCATGTGcaggcgcaacagcagcagcagcaacagcagcaacagcaacaacaacaacagcagcaacaacaacagcagcaacatgcggcacaacatcatcatcagcatttgCACGCTCAGCAATTGTTGGCGCAaagtcagcaacagcagcagcagcagcagcagcaacagcagcagcaacagcaacaacagcaacatcaacagcagcagcaggcggcggtGCATGCAGCACAGCATGCAGCGCATGCCACGCATGCGGATATTGGTGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCACGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATggACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgttggtggtggtggtggcggcattggtggtggtggtgttaaTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCGTGGAACGAAGATGCCCTACAGAATGCCTTGGAGGCGCTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCCAAAGCATTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACATGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCCGTGCAGAAAGCAAGTGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCCCGTTCGAATCCAACGCCTTGGTCCGAGGATGCTATGAACGAGGCATTGAACTCGGTGCGCGTCGGTCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAATACGATGTGGTGGCCAACACAACTGGCATCTCCCTTAACAACACATCCGGCAACACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCATCAGTTCCCGTACAGTCCGTCGCCGCATGCGCAGACGCCGCAGCATCATGGCACGCCGCAGCATCATGGCACGCCGCTGCATCATAGTACGCCGCATCACAGTTCGCAGCAGGGACCGCCGACGCCGCAGGGCATGCAACAGCATGTGGTGCACATGCAACAGTCGCCACATCAGgcgcatcatcagcagcagcacatgcAACAGGATGTCGTCACATCGAGCAGTCAGGTGGtgcacagccaacagcagcagcagcaacaacagcagcagcagcagcaacagcagcaacaacagcagcagcagcagcagcaacagttgcagcagatCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
Protein Sequence: MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESDLQGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQQAVVGNIVNASLVSGAPSPTLEQQHHQQQQQQQQQQQQQQQQQEHQQQVQQQQLVNSALLAQHTLATNSGIQLAAGQQLLSTTGGNSSSSSSSLQQLQQQQLQPTPRKSRLRKRSKSPDLQLQTQSQQQQQQQQQQQQQQQQQQQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVATTGDDSDCDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQHAAQHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQQQQQHQQQQQAAVHAAQHAAHATHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGIGGGGVNAGEKGQFNGPKAWTQDDMNSALDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTTGISLNNTSGNTTGSIEIIEHSQENSLHMLQHQFPYSPSPHAQTPQHHGTPQHHGTPLHHSTPHHSSQQGPPTPQGMQQHVVHMQQSPHQAHHQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00512640;
90% Identity: iTF_00479563;
80% Identity: iTF_00520004;