Dmay004826.2
Basic Information
- Insect
- Drosophila mayaguana
- Gene Symbol
- -
- Assembly
- GCA_037075325.1
- Location
- JBAMCG010000040.1:17923410-17929536[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.2e-09 1.4e-05 24.7 0.0 17 40 610 634 605 637 0.85 2 4 7e-14 1.1e-10 41.1 0.1 2 39 649 686 648 689 0.94 3 4 1.6e-17 2.5e-14 52.7 0.0 1 45 703 748 703 748 0.98 4 4 1.7e-19 2.5e-16 59.1 0.0 1 43 755 798 755 799 0.97
Sequence Information
- Coding Sequence
- ATGATTTATACTAATCTATCTATCCATTTATTGTTCTGTACATTACAGGGTCTGTTGCGCACCGCGGagcaattgaaaatcaaaggACTGTGCGAGCCGGCCGAGAATGCGGACGATTTGAATGACGCTGCATCGGCGATAATCACTGTATCGGAGAACATACAGCAGGCGGTCGTTGGCAATATTGTGAATGCGAGTATAGTGTCAGGTGCTCCGTCGCCCAcactcgagcagcagcagcatcatcagcaacagcagcagcagcagcaacacgagcaacagcagcaacaattggtGAATAGTGCGCTGCTGGCACAGCATACGCTTGCAACCAGCAGTGGCATACAGTTGGCGGCAGGGCAACAGCTGTTGAGCACTAcaggcggcaacagcagcagcagcagcagtagcctgcaacagttgcagcagcagcaacaacagcaacagcaacagttgcagccaaCGCCGCGTAAATCGCGACTGCGTAAACGCTCCAAATCGCCAGATTTGCAACTGCAAACACaatcgcaacagcagcagcagcagcaacagcaacagcagcagcagcagcagcaacagcaacagcagcaacatcatcatcatccacaAACGATACTCATCCAGGGACAGAATCAGACATCGATCGTGAGTCTGCAGCAAACGGCCGACGGCAATTATATACCAGTTGCAACAACTGGCGACGACTCCGATTGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGACACACGCGATCTATCAAatcCCACCGAACAGCTCGATATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAACGCACCATCATGCCACCGGGGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAGAGCGAGGTAATCGAGGCCAAGCATCTGGCTCATGTGCaggcgcagcaacaacagcagcagcagcaacaacaacagcaacaacagcagcagcagcagcagcaacagcaacaacagcagcaacagcagcagcagcagcaacaacatgcagcacatcatcatcagcatttgCACGCTCAGCAATTGTTGGCGcaaagtcagcagcagcagcaacagcagcagcagcaacagcagcagcaacagcagcaacaacagcagcaacaacaacagcagcatcaacagcagcagcaggcggcggtgCATGCAGCACAGCATGCAGCACATGCCACGCATGCGGATATTGGTGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgttggtggtggtggtggtggtggcggcattggtggtggtggtgttaaTGCTGGCGAGAAAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCATTGCGTTCGGGTCAAATATCGGCTAATAAAGCATCCAAAGCGTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGCATTCGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCTGGCAATACGTCTGTACAGAAAGCAAGTGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCTATGAACGAGGCATTGAACTCGGTGCGCGTCGGTCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAATACGATGTGGTGGCCAATACAAGTGGCATCTCGCTTAACAACACGTCCGGCAATACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCATCAGTTCCCGTACAGTCCGTCGCCGCATGCGCACGGAACGCCGCAGCATCATGGCACGCCGCTGCATCACAGTACGCCGCATCACAGTTCGCAGCAGGGGCCGCCGACGCCGCAGGGCATGCAGCAGCATGTGGTGCACATGCAACAGTCGCCGCATCAGgcgcatcatcagcagcagcacatgcaACAGGATGTCGTCACGTCGAGCAGTCAGGTGGTgcacagccaacagcagcagcaacagcagcagcagcaacaacaacagcagcagcaacagcagcagcagcagttgcagcagatCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MIYTNLSIHLLFCTLQGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQQAVVGNIVNASIVSGAPSPTLEQQQHHQQQQQQQQHEQQQQQLVNSALLAQHTLATSSGIQLAAGQQLLSTTGGNSSSSSSSLQQLQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLQTQSQQQQQQQQQQQQQQQQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVATTGDDSDCDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEQLDIDNHLAQQIHRLDQSPMHSITHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAAHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQAAVHAAQHAAHATHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGIGGGGVNAGEKDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLNNTSGNTTGSIEIIEHSQENSLHMLQHQFPYSPSPHAHGTPQHHGTPLHHSTPHHSSQQGPPTPQGMQQHVVHMQQSPHQAHHQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512640;
- 90% Identity
- iTF_00479563;
- 80% Identity
- -