Dpar014963.2
Basic Information
- Insect
- Drosophila paranaensis
- Gene Symbol
- -
- Assembly
- GCA_035047545.1
- Location
- JAWNPL010000233.1:1118739-1124324[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-09 2.6e-06 27.0 0.0 7 40 572 606 571 609 0.84 2 4 7.9e-14 1e-10 41.1 0.1 2 39 621 658 620 661 0.94 3 4 1.9e-17 2.4e-14 52.8 0.0 1 45 675 720 675 720 0.98 4 4 1.9e-19 2.4e-16 59.2 0.0 1 43 727 770 727 771 0.97
Sequence Information
- Coding Sequence
- ATGGGTCTGTTGCGCACCGCGGAGCAGTTGAAAATCAAGGGTCTGTGCGAGCCGGCCGAGAATGCGGACGATCTGAATGACGCTGCATCGGCGATAATCACCGTATCGGAGAACATACAGCAGGCGGTCGTTGGCAATATTGTGAATGCGAGTCTGGTGTCCGGTGCGCCGTCGCCCacactcgagcagcagcaccatcagcagcagcagcagcaacagcaccagcaacagcagcagcagcagcagcagcaacaggagcatcagcagcaggtgcagcagcagcagcagcagttggtgAATAGCGCGCTGCTGGCCCAGCATACGCTCGCGACGAGCGGTGGCATACAGTTGGCGGCAGGGCAACAGCTGCTGAGCAACAcaggcggcaacagcagcagcagcagcagcagcttgcaacagttgcagccagCGCCGCGTAAATCGCGACTGCGTAAACGCTCCAAATCGCCAGATTTGCAGCTGcaaacacagcagcaacagcagcagcaacagcaacagcaacagcagcaacatcatcatcatccgcAAACGATACTCATCCAGGGCCAGAATCAAACGTCGATCGTGAGTCTGCAGCAGACAGCCGACGGCAATTATATACCAGTGGCAACCACTGGCGACGACTCCGACTGCGAGAACAAGCCGCAGAAGATCTGCAAGACAGAGCAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATGCCACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAGAGCGAGGTAATCGAGGCCAAGCATCTGGCTCATgtgcaggcgcagcagcaacagcaacagcagcagcagcagcaacaacaacaacaacagcagcaacagcaacagcaacagcagcaacagcaacagcagcaacagcaacatgcagcacatcatcatcagcatttgCACGCTCAGCAGCTGTTGGCGcaaagtcagcagcagcagcagcaacaacagcaacatcaacagcagcagcagcaggcggcggtGCATGCAGCACAGCATGCAGCGCATGGCACGCATGCGGATATTGGTGGTGCCACTGTCATGGAGATTGATCCCAGCCAGATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGTGTTTGCGGCCCCGGCgccggtggtggtggtggtggtggcggcattggtggtggtggtggtggtggcggcattggtggtggtggtgttaaTGCTGGCGAGAAAGCTTTAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCAACGACCTTATGGCAGCGTGCTCATCGTCTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCGTGGAACGAGGACGCCCTGCAGAATGCCTTGGAGGCCCTACGCTCGGGTCAAATATCGGCGAATAAAGCATCCAAAGCGTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCGGAGGACCTGGAGCGTGCATTGGAGGCGATACGCGCTGGCAACACGTCCGTACAGAAAGCAAGTGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGACGCCATGAACGAGGCATTGAACTCGGTGCGCGTCGGTCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAATACGACGTGGTGGCCAACACCAGTGGCATCTCGCTTAACAACACGTCCGGCAACACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCATCAGTTCCCGTACAGTCCGTCGCCGCACGCGCAGACGCCGCAGCACCACGGAACGCCGCAGCATCACGGCACGCCGCTGCACCACAGTACGCCGCATCACAGTTCGCAGCAGGGACCGCCGACGCCGCAGGGCATGCAGCAGCATGTGGTGCACATGCAGCAGTCGCCGCATCAGgcgcaccatcagcagcacaTGCAGCAGGACGTTGTCACCTCGAGCAGCCAGGTGGtgcacagccaacagcagcagcagcagcagcaacagcagcaacaacaacagcagcagcagcagcagcagttgcagcagatCTATCAACATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQQAVVGNIVNASLVSGAPSPTLEQQHHQQQQQQQHQQQQQQQQQQQEHQQQVQQQQQQLVNSALLAQHTLATSGGIQLAAGQQLLSNTGGNSSSSSSSLQQLQPAPRKSRLRKRSKSPDLQLQTQQQQQQQQQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVATTGDDSDCENKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAAHHHQHLHAQQLLAQSQQQQQQQQQHQQQQQQAAVHAAQHAAHGTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGGGGGGGIGGGGGGGGIGGGGVNAGEKALDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLNNTSGNTTGSIEIIEHSQENSLHMLQHQFPYSPSPHAQTPQHHGTPQHHGTPLHHSTPHHSSQQGPPTPQGMQQHVVHMQQSPHQAHHQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512640;
- 90% Identity
- iTF_00479563;
- 80% Identity
- -