Dmet009272.2
Basic Information
- Insect
- Drosophila mettleri
- Gene Symbol
- -
- Assembly
- GCA_035047625.1
- Location
- JAWNPI010000085.1:13100041-13109667[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9e-09 1.3e-05 24.8 0.0 17 40 614 638 609 641 0.85 2 4 6.9e-14 1e-10 41.1 0.1 2 39 653 690 652 693 0.94 3 4 1.4e-17 2e-14 53.0 0.0 1 45 707 752 707 752 0.98 4 4 1.6e-19 2.4e-16 59.1 0.0 1 43 759 802 759 803 0.97
Sequence Information
- Coding Sequence
- ATGGGGCCCGGGTCCTGGGGCCTGGGGGTAGTCAGCCAAGTGGGCATGGGCGTGGGCCAACTGGACTCAGGTCTGTTGCGCACCGCGGAGCAGCTGAAAATCAAAGGACTGTGCGAGCCGGCCGAGAACGCGGACGATTTGAATGACGCTGCATCGGCGATAATCACTGTGTCGGAGAACATACAGCAGGCGGTCGTTGGGAACATTGTGAATGCGAGTCTAGTGTCTGGTGCGCCGTCGCCCAcactcgagcagcagcagcagcagcatcaccagcagcaacagcagcagcagcagcagcaacaagagcatcagcagcaggtgcaacagcagcaattggtGAATAGTGCGCTGCTGGCACAGCATACGCTTGCCACAAACAGTGGCATACAGTTGGCCGCTGGGCAACAGCTGTTGAGCAACAcaggcggcaacagcagcagcagcagcttgcagcagttgcagcagcaacagcagcagcagcaacaacagttgcagccAACGCCGCGTAAATCGCGACTGCGTAAACGCTCCAAGTCGCCAGATTTGCAACTGCAAACACAgtcgcaacaacagcagcagcagcagcaacaacagcaacagcagcagcagcagcaacaacatcatcatcatccacAGACGATACTCATCCAGGGACAGAATCAAACATCGATCGTGAGTCTGCAGCAAACGGCCGACGGCGATTATATACCAGTTGCAACAACCGGCGACGACTCCGATTGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGAcggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCTGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCACCACGCCACTGGGGACGAGAGCAACTCGAATCTGGTGCAGAATATCAAGAGCGAGGTGATCGATGCCAAGCATCTGGCACATgtgcaggcgcagcagcagcagcagcaacagcagcagcagcagcaacaacagcagcaacaacagcagcaacagcagcagcagcagcagcaacatgcaacacatcatcatcagcatttgCACGCTCAGCAATTGTTGGCGCAaagtcagcaacagcagcagcagcagcaacaacagcaacaacagcagcaacatcagcagcagcagcaggcggcggtGCATGCGGCACAGCATGCAGCGCATGCCACGCATGCGGATATTGGTGGTGCCACTGTCATGGAGATTGATCCCAGCCAGATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCACATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGTGGCCACGGCGCCGGTGGTgttggtggcggtggcggcggcggcggcggtggtggtggtggtggtggcggcattggtggtggtggtggtggtgtcaATGCTGGCGAGAAAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCATCGCTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGATGCCCTACAGAATGCCTTGGAGGCACTCCGATCGGGTCAAATATCGGCTAATAAAGCATCCAAAGCGTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGCATTCGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGACGACTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAACACGTCCGTGCAGAAAGCTAGTGCCGAGTTCGGTATACCGACAGGAACACTCTATGGACGCTGCAAGCGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCACTGAACTCGGTGCGCGTCGGTCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAGTACGACGTGGTGGCCAACACGAGTGGCATCTCGCTTAACAATACGTCCGGCAACACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCATCAGTTCCCGTACAGTCCCACGCCGCATCACAGCTCGCAGCAGGGACCGCCGACGCCGCAgggcatgcagcagcagcagcagcatgtggTGCACATGCAGCAGTCGCCACATCAGgcgcatcatcagcagcagcagcagcacatgcAACAGGACGTCGTCACATCAAGCAGCCAGGTGGTgcacagccaacagcagcagcagcaacagcagcaacagcagcagcagcagttgcagcagatcTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MGPGSWGLGVVSQVGMGVGQLDSGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQQAVVGNIVNASLVSGAPSPTLEQQQQQHHQQQQQQQQQQQEHQQQVQQQQLVNSALLAQHTLATNSGIQLAAGQQLLSNTGGNSSSSSLQQLQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLQTQSQQQQQQQQQQQQQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGDYIPVATTGDDSDCDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQNIKSEVIDAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQHATHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQHQQQQQAAVHAAQHAAHATHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGHGAGGVGGGGGGGGGGGGGGGGIGGGGGGVNAGEKDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPDDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLNNTSGNTTGSIEIIEHSQENSLHMLQHQFPYSPTPHHSSQQGPPTPQGMQQQQQHVVHMQQSPHQAHHQQQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512640;
- 90% Identity
- iTF_00479563;
- 80% Identity
- -