Epin015193.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- -
- Assembly
- GCA_947363495.1
- Location
- OX376163.1:16212106-16221594[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-10 3.6e-08 33.6 0.0 4 39 147 183 144 187 0.89 2 4 1.2e-10 3e-08 33.9 0.3 2 39 199 236 198 239 0.92 3 4 7.3e-14 1.8e-11 44.1 0.0 2 45 254 298 253 298 0.96 4 4 3.1e-18 7.6e-16 58.2 0.0 1 44 305 349 305 350 0.96
Sequence Information
- Coding Sequence
- ATGCCTGGCAACGGAGCAGCGCAAATCAAACGCGAACCGCTCTCTGACGAAGACGATAGTAACTCGCTCGCTCACGGGTACTTGGCCAATCAGTCCCAAGGCCTGGAAGAGTTGGCACCGCTGGCGCCGGCGGGCCCAGCCGCCACCCCGGTCTGCGTGAAGCAAGAGCCGACTGATGCTGTCCCAGCTACCACGCTAGAGACTCTGGAACCGGCATCACATTCCACGGGCGCCACCACCCTCATCGACAGACACATGTCAATGTTGTGCTCAACCGAAGTGCCTGAGTCATCGGACTTTCTGCCGCTGATGGCTGTCAAAGACGAGCCTTTGTCTGAAGGAGAACAACAACACTATAGTGAAGAAGACACCAGTGATTCCTGCGGGACACAACCCGAACCAACGACTAGAGCCAGTCCAAAAAGCTGGACACAGAAGGACATGGATAACGCGTTGGAAGCGTTAAGGAAACACAACATGAGTCTTACCAAGGCATCAGCGACATACGGCATTCCGTCCACCACACTCTGGCAGCGCGCGCACCGCCTCGGCATTGACACACCGAAGAAGGAAGGAGCCTCCAAGTCTTGGAGCGAAGCTGATCTCAGGGGGGCCCTACATGCCTTGAGAGCGGGCGCTATATCTGCCAATAAGGCTAGTAAGGCTTATGGCATCCCCAGCAGCACTCTATACAAGATCGCTCGCCGGGAAGGCATCCGTCTGGCGGCGCCGTTCAACGCCGCGCCAACCGCCTGGCGCCGCGCCGACCTCGAGCGCGCGCTCGCCTCCATACGATGCGGGGCGAGTTCTGTGCAGCGCGCGGCGTCGCAGTTCGGAATACCCACTGGGACGTTGTACGGGCGCTGCAAACGCGAAGGCATCGAGTTGTCGCGCTCCAATCCCACGCCGTGGTCTGAAGATGCCATGGGGGAAGCTTTGGAAGCTGTCAGGGTTGGTCAAATGTCTATAAACCAAGCAGCTATTCACTACAACCTGCCATATTCATCTCTCTACGGAAGATTCAAACGGTGCAAATACCAGACGCAGGAACCAACTCTTGGCTGCAAGTACAGGGGCTTTAGGGATCCTATTAATTTTAGCCCATGTTGCAAAAATTCTAGATTCGGAGCTTATTTCATACCTTCGGAATTCGGTTGA
- Protein Sequence
- MPGNGAAQIKREPLSDEDDSNSLAHGYLANQSQGLEELAPLAPAGPAATPVCVKQEPTDAVPATTLETLEPASHSTGATTLIDRHMSMLCSTEVPESSDFLPLMAVKDEPLSEGEQQHYSEEDTSDSCGTQPEPTTRASPKSWTQKDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRCGASSVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQEPTLGCKYRGFRDPINFSPCCKNSRFGAYFIPSEFG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651651; iTF_01302213; iTF_00640197; iTF_00275174; iTF_00177991; iTF_00072657; iTF_01220579; iTF_00146309; iTF_00011863; iTF_00012859; iTF_00736536; iTF_00832831; iTF_00647916; iTF_01501024; iTF_01336749; iTF_00844245;
- 90% Identity
- -
- 80% Identity
- -