Amou016248.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383971.1:1216004-1222960[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-10 4.1e-08 34.1 0.0 4 39 176 212 173 216 0.89 2 4 1.3e-12 5e-10 40.2 0.2 1 39 227 265 227 268 0.95 3 4 3.9e-14 1.5e-11 45.1 0.0 2 45 283 327 282 327 0.96 4 4 4.9e-18 1.8e-15 57.6 0.0 1 43 334 377 334 378 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCCAAGGATTGCCTCAAATAAAATGCGAGCCTTCGTCGGAAGAAGAAGACGGCAACTCGCAATTTACTCATAAATATTTAAATACACAGCTGGGCCCTTGTGAACTTCGATTTGTAAAATTAGAGCCCCAATCTCTAAACGATGACTGTGCTTCTGATGCTTCACATCTGTTACACCACTTACAGGCATCTTCTTTGGAAGTACTGGCACCAGCTGGGCCAGCGGCGACGCCTGTATCGGTCTGCATTAAACAAGAGCCTGTGCCACCGGCCGCCACGTTTGAAACGTTGGAGTCCGCTCCTCACGCTCAAACTGGTTCTACACTAATCGACCGACATTTGGCAATGTTGACTGCTAACGATCTGCCAGACTCTTCTGACTTCATGCCGTTAATGCATGTCAAAGATGAACCGCTTTCTGAAGGAGAGCAACACACTCAAAGCGGCGACGATACGAGCGATTCCTCAACACAGCTGGAACCTGCCGCACGAGGGAGCCCAAAGAGCTGGACTCAGAAAGACATGGACAACGCATTGGAGGCTTTGAGAAGTCACAATATGAGTCTTACTAAGGCTTCAGCAACTTACGGCATTCCATCGACGACTCTCTGGCAGCGAGCGCATCGGCTGGGTATCGACACGCCTAAGAAAGAAGGCTCAGCTAAATCCTGGACAGAAGATGACTTGAGAAGAGCTTTACATGCGTTACGAGCTGGAGCAATTTCAGCGAACAAGGCTAGCAAGGCTTATGGCATCCCAAGCAGCACCCTGTACAAGATAGCCCGACGTGAAGGCATCCGCCTGGCAGCCCCGTTCAACGCCGCGCCCACCGCCTGGCGCCGGGCGGATCTGGAGCAAGCCCTCGCTTCCATACGCTGCGGACACACGTCTGTGCAACGCGCCGCTACACAGTTCGGAATCCCTACAGGGACACTGTATGGGAGATGTAAACGTGAAGGCATTGAGCTGTCGCGATCAAACCCCACTCCATGGTCTGAAGACGCCATGGGTGAAGCACTTGAAGCTGTCAGAGTTGGTCAAATGTCGATAAATCAAGCGGCAATTCACTACAACCTGCCTTATTCTTCGCTTTACGGCCGTTTTAAGAGGTGCAAGTACCAGGTACAGGGACTTCCAAACCAGCAAGATCTTCAGAAGCCTCCCGAAATGGAAACTCAACACACCGACAATATGTACTTCCAACAAATACCGTCCCATACCGTCCACCATCCCTCCGACGACCAACAATACCACAACATGTACATTGAACACGATCCATCGATGCCCACCCACTTACCGCAACAGGAGCAAATGTATAACCAGCAGGCAATGTACTATAACCAGTGTAACAGTATCGCTAGTTGA
- Protein Sequence
- MPGQGLPQIKCEPSSEEEDGNSQFTHKYLNTQLGPCELRFVKLEPQSLNDDCASDASHLLHHLQASSLEVLAPAGPAATPVSVCIKQEPVPPAATFETLESAPHAQTGSTLIDRHLAMLTANDLPDSSDFMPLMHVKDEPLSEGEQHTQSGDDTSDSSTQLEPAARGSPKSWTQKDMDNALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSAKSWTEDDLRRALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLEQALASIRCGHTSVQRAATQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQVQGLPNQQDLQKPPEMETQHTDNMYFQQIPSHTVHHPSDDQQYHNMYIEHDPSMPTHLPQQEQMYNQQAMYYNQCNSIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00720139;
- 90% Identity
- -
- 80% Identity
- -