Gmel012464.2
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292295.1:16167468-16181010[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.8e-11 5.1e-08 33.0 0.0 4 39 181 217 178 221 0.90 2 4 5.3e-11 3.4e-08 33.5 0.3 2 39 233 270 232 273 0.92 3 4 3.3e-14 2.1e-11 43.8 0.0 2 45 288 332 287 332 0.96 4 4 9.6e-18 6.3e-15 55.1 0.0 1 43 339 382 339 383 0.96
Sequence Information
- Coding Sequence
- ATGCCTGGCAACGGATTGGCGCAAGTGAAATGCGAACCACTTTCGGATGAGGACGATAGCAATCCGAACTTCGCCAACAACTATTTCACTAATCAGctCCCCTCCTTAGGACATCACATAAAATCGGAACATGACAGTCACAGCGAAGAAAACGTACCGTCACAAATTTTACAACATTTACAGAGGCAGCCGGCGCTGGAGGAGCTGGTGCCGCCGGCGCCGGCGGGCCCGGCCGCCACGCCCGTGTGCGTCAAGCAGGAGCCCGCCGAGCCGCCGCCCGCCCTCGCGCTCACCCTCGAGACGCTCGAGCCGGCCCCGCACGCCGCCGCCACCGGCTCGACACTGCTGGACCGGCATATGACGATCCTCAGTTCAAACGAAGTGCCTGACTCAGCAGACTTCATGCCGTTGATGTCTGTCAAAGACGAACCACTCTCGGAAGGAGAGCAACAGCATTTAAGTGGCGAGGATACCAGTGACTCGTGCAGCACCCAGCCCGAGCCGTCGACCCGAAGCAGCCCCAAGAGTTGGACCCAACGGGACATGGACAACGCGCTCGAAGCGCTTCGGAAACACAACATGAGTCTCACCAAGGCGTCAGCGACGTACGGTATACCGTCGACCACACTGTGGCAGCGCGCGCACCGCCTCGGCATTGACACGCCGAAGAAAGAGGGAGCTTCCAAGTCGTGGAGCGAGGCCGACCTGCGCGGCGCACTGCACGCACTCAGGGCCGGCGCTATATCTGCCAATAAAGCGAGCAAGGCTTACGGTATTCCAAGCAGCACACTGTACAAGATAGCGCGGCGCGAGGGCATCCGGTTGGCGGCGCCGTTCAACGCGGCGCCGACGGCGTGGCGCCGCGCCGACCTGGAACGCGCGCTCGCCTCCATCCGCTGCGGCGCCAGCTCCGTGCAGCGCGCCGCCTCGCAGTTCGGCATCCCAACCGgCACGTTGTACGGCAGGTGTAAGCGAGAAGGCATCGAGTTGTCCCGCTCTAACCCCACGCCGTGGTCCGAAGATGCCATGGGCGAAGCACTCGAAGCTGTTAGGATAGGCCAGATGTCGATAAACCAGGCAGCCATACATTACAACCTGCCGTACTCATCGCTCTACGGACGCTTCAAGCGGTGCAAATACCAAACGCAGGGTCTGCAGCCACTGCAGCAGCAGGAGATGCAGAAGAACATAGAGATGGAGCATTCTTTACCTCAAGAGTTATCATACTACCATCAATTACCACATGGACATCAGCAACCATCCGAGGACCACACGCACATACCATACATTCACAATATAAACATGAGCATGCACGAGCATCAAGATACGTCCGTTCATAATGCTCTGCTACCAGACCAGTACAGTCAAGCGATGTATTACGCACACAGTTGCAACAGCATGGTCTCCAGTTGA
- Protein Sequence
- MPGNGLAQVKCEPLSDEDDSNPNFANNYFTNQLPSLGHHIKSEHDSHSEENVPSQILQHLQRQPALEELVPPAPAGPAATPVCVKQEPAEPPPALALTLETLEPAPHAAATGSTLLDRHMTILSSNEVPDSADFMPLMSVKDEPLSEGEQQHLSGEDTSDSCSTQPEPSTRSSPKSWTQRDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRCGASSVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQGLQPLQQQEMQKNIEMEHSLPQELSYYHQLPHGHQQPSEDHTHIPYIHNINMSMHEHQDTSVHNALLPDQYSQAMYYAHSCNSMVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00720139;
- 90% Identity
- -
- 80% Identity
- -