Acon012650.1
Basic Information
- Insect
- Acrobasis consociella
- Gene Symbol
- -
- Assembly
- GCA_963555685.1
- Location
- OY743114.1:19888331-19898138[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.6e-10 1.5e-07 32.0 0.0 4 39 176 212 173 216 0.89 2 4 1.1e-10 4.5e-08 33.6 0.3 2 39 228 265 227 268 0.92 3 4 1.7e-14 6.9e-12 45.8 0.0 2 45 283 327 282 327 0.96 4 4 3e-18 1.2e-15 57.8 0.1 1 44 334 378 334 379 0.96
Sequence Information
- Coding Sequence
- ATGCCGGGCAACGAAGCGCACATAAAACGCGAACCGCTCTCGGACGAAGACGACAGCAACTCTTTCGCCCACGGCTACTTGCTCAATCAGCTGccctcactgggacttcatgtGAAATCTGAGCACGAGTGCAGACATGAAGGTGGCGTGCCTTCGATGCAACATTTGCAGCTGCAGCATTTACAGTCCCAAGGGCTGGAGGAGCTGGCACCGTTGGCGCCGGCGGGCCCCGCCGCCACGCCCGTGTGCGTCAAGCAGGAGGTCGCTGACGCCGCGCCCGCTACCACTCTGGAGACCCTGGAGCCGGCTCCTCATGCCACGGGTGCGACTCTCCTCGACAGACACATGTCGCTGTTGTGCGCGCCCGAAGTGCCTGAGTCATCGGATTTTATGCCCCTGATGGCTGTCAAAGACGAGCCTTTGTCTGAAGGAGAGCAGCAGCACTACAGCGGCGACGACAGCGACTCGTGCGGCACGCAGCCCGAGCGCGCGGCGCGCGGCAGCCCCAAGAGCTGGACGCAGCACGACATGGACAACGCGCTAGACGCTCTGCGGAAACACAACATGAGTCTCACCAAGGCATCAGCGACGTACGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGCCTCGGCATCGACACGCCCAAGAAGGAGGGCGCCGCCAAGTCCTGGAGCGAGGCCGACCTCCGCGGCGCCCTGCACGCGCTGCGGGCTGGCGCTATATCGGCCAACAAGGCCAGCAAGGCTTATGGCATCCCCAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGCCTGGCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGCAGCGCGCGCTGGCCGCCATCCGCTGCGGCGCCAGCTCCGTGCAGCGCGCCGCCTCGCAGTTCGGGATACCCACAGGAACGCTGTATGGCCGATGCAAACGCGAGGGCATCGAGTTATCGCGCTCAAACCCCACGCCCTGGTCCGAGGATGCGATGGGAGAAGCGCTCGAGGCGGTCAGGGTGGGCCAGATGTCGATAAACCAAGCAGCCATCCACTACAACCTGCCGTATTCCTCGCTTTATGGACGCTTCAAGAGGTGCAAGTACCAAGCACAGCATTTCCCACCGACACAGCAGCAGGACACGCACAAGCCACCGCAGCCGGAGCAGGCCTGCCAACCGCACGAGGGGTACTACCAACAGCACGAGCAGTACAGCCAACTCCACGACCACCAGATGGAGAGCATGCAGTTCGACTACCAAGGGTACTACCACAGCGGCCTCGTCAGCTGA
- Protein Sequence
- MPGNEAHIKREPLSDEDDSNSFAHGYLLNQLPSLGLHVKSEHECRHEGGVPSMQHLQLQHLQSQGLEELAPLAPAGPAATPVCVKQEVADAAPATTLETLEPAPHATGATLLDRHMSLLCAPEVPESSDFMPLMAVKDEPLSEGEQQHYSGDDSDSCGTQPERAARGSPKSWTQHDMDNALDALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALAAIRCGASSVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQAQHFPPTQQQDTHKPPQPEQACQPHEGYYQQHEQYSQLHDHQMESMQFDYQGYYHSGLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00720139;
- 90% Identity
- iTF_00012859;
- 80% Identity
- -