Eelu042635.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- -
- Assembly
- GCA_018467065.1
- Location
- CM031592.1:18693586-18701173[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-11 3.4e-08 34.6 0.0 4 39 171 207 168 211 0.90 2 4 6.8e-11 7.1e-08 33.6 0.2 3 39 224 260 222 263 0.91 3 4 4e-14 4.2e-11 43.9 0.0 2 45 278 322 277 322 0.96 4 4 9.1e-19 9.5e-16 58.8 0.0 1 45 329 374 329 374 0.96
Sequence Information
- Coding Sequence
- ATGCCTGGCAACGGAGCAACGCAAATAAAACGCGAACCTCTCTCTGACGACGACGACAGCAACTCGTTCGCTCACAGCTACTTAGCCAATCAGCTACCCTCACTGGGACGACGCGTCAAGCCTGAACATGGATGTAGTCCTGACGACGTGCCGCAGATCCTGCATCATTTGCAGTCACAAGGACTGGAAGAGTTGGCACCGCTGGCGCCGCCGGGCCCAGCCGCCACTCCCGTCTGCGTGAAGCAGGAGCCGACTGACGCCGCACCAGCAACGTCGCTGGAGACTCTGGAACCAGCACTTCACGCCACGGGCGCCACGCTGCTCGACCGACACATGTCCATGCTGTGCTCCGAAGTGCCTGAATCGTCTGACTTCATGCCCCTGATGGCTGTCAAAGACGAGCCGCTGTCTGAGGGAGAACATCAGTACAGCGGAGAAGACACCAGCGACTCGTGCGGGACGCAGCCAGAGCCAGCTTCCAGGAGCAGTCCCAAGAGCTGGACCCAGCGGGACATGGACAACGCTCTCGAGGCCTTGAGGAACCACAACATGAGTCTCACCAAGGCTTCGGCAACCTATGGCATCCCGTCCACGACGCTCTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCGAAGAAGGAAGGCGCCTCCAAGTCCTGGAGCGACGCGGATCTCAAGGGGGCACTGCATGCGTTAAGGGCGGGAGCCATTTCCGCGAATAAGGCTAGCAAGGCATATGGCATCCCCAGCAGCACGCTGTACAAGATAGCCCGGCGCGAGGGCATCCGGCTCGCCGCGCCGTTCAACGCCGCGCCCACCGCCTGGCGCCGCGCGGACCTGGAGCGGGCGCTGGCTTCTATACGATGCGGGGCTAGCTCCGTGCAGCGGGCTGCCAGCCAGTTTGGGATTCCCACCGGAACTCTATACGGGCGCTGCAAACGCGAAGGCATCGAATTGTCCCGCTCCAACCCCACGCCCTGGTCCGAGGACGCCATGGGAGAGGCCCTTGAAGCTGTTAGGGTGGGGCAGATGTCTATAAATCAAGCCGCTATACACTATAACTTACCATACTCGTCCCTTTACGGAAGATTCAAAAGGTGCAAGTATCAAACACAGAATCTCCAACCGATGCAGCAGACGGACATCCAAAAGCCAATGGAAATGGAGCAGGTGTGCCAACCGCACGAGGTGTACTACCAACATCAGGAGCAGTACATGCAACCTAACGAAATGATGGATATGCAGAACATTCAGAGTATTCAGATGTTCGACTACCAGAGCTACTATCAGAATGGAGTGGTCAGTTGA
- Protein Sequence
- MPGNGATQIKREPLSDDDDSNSFAHSYLANQLPSLGRRVKPEHGCSPDDVPQILHHLQSQGLEELAPLAPPGPAATPVCVKQEPTDAAPATSLETLEPALHATGATLLDRHMSMLCSEVPESSDFMPLMAVKDEPLSEGEHQYSGEDTSDSCGTQPEPASRSSPKSWTQRDMDNALEALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSDADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRCGASSVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQNLQPMQQTDIQKPMEMEQVCQPHEVYYQHQEQYMQPNEMMDMQNIQSIQMFDYQSYYQNGVVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00720139;
- 90% Identity
- iTF_01220579;
- 80% Identity
- -