Basic Information

Gene Symbol
Xbp1
Assembly
GCA_949629135.1
Location
OX451396.1:3892779-3894517[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.4 1.4e+04 -2.8 0.0 17 25 34 42 32 43 0.71
2 3 4.5e-18 8.5e-15 55.5 4.2 2 52 47 97 47 99 0.97
3 3 1e-05 0.019 16.0 0.6 30 58 89 117 89 121 0.90

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTGCCTAACAACTACCTGGCTATGGAGGCGGTTGAGGAGATGGAGTCCAAGGTGCTGGTGGACCTGCCATCTCCCGCCCCCTCCAGGAAGCGCCGCTTGGACCATTTGACATGGGAGGAGAAGATGCAAAGGAAGAAGCTGAAGAACCGTGTAGCGGCTCAGACGTCGCGCGACAGGAAGAAGGCAAAGATGGATGAGATGGAAGATCGCATCAAATACTTTATGGATATGAATGACAAGTTGACAAGTGAGGTGGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGTGAAGCGGCCGCGGCGCGGAACGTCGCGGGGACCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGTCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCAGATGAATACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTGCAGGAACGCCTGAAAATGACACAATCAGGAAAACTGGAAAGTGCATTGAAGGACCTAAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCAGTGAAGGTGCAGTCATAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEEMESKVLVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNDKLTSEVESLKALNERLLSENATLRSEAAAARNVAGTPRPAESIPQQKEGSPTAIRAARLLLAMCLLSQTSSHTSIQMNTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPVKVQS