Basic Information

Gene Symbol
Xbp1
Assembly
GCA_905220335.1
Location
LR999901.1:3142345-3144071[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.2e-18 1e-14 55.0 8.4 2 53 47 98 47 103 0.94
2 2 5.2e-05 0.074 13.8 0.6 33 58 92 117 91 121 0.89

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTGCCCAACAACTACCTGGCTATGGAGGCGGTCGATGAGATGGAGACCAAGGTGGTGGTAGACCTGCCGTCTCCCACTCCCTCTAGGAAGCGCCGCCTGGACCACTTGACATGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACTTCTCGCGACAGGAAGAAAGCGAAGATGGATGAAATGGAGGACCGCATCAAATACTTTATGGATAAGAATGAGAAGTTGACCAGTGAGGTAGAGAGCTTGAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGTGAAGCGGCGGCGGCGCGGAGCGTCGCGGGGGCCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCAGACGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTTCAGGAACGCCTCAAAATGACACAGTCAGGAAAACTGGAGAGTGCGTTGAAGGACCTAAAGTGGTGGGGACCGCAGCAAAGCACCTGGAATCCAATGAAAGTTCTATCGTAG
Protein Sequence
MSAPIIITVPNNYLAMEAVDEMETKVVVDLPSPTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDKNEKLTSEVESLKALNERLLSENATLRSEAAAARSVAGAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTSIQTSTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPMKVLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-