Basic Information

Gene Symbol
Xbp1
Assembly
GCA_950022335.1
Location
OX465489.1:3721752-3724332[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-18 5.5e-15 56.3 4.9 2 52 47 97 47 100 0.97
2 2 6.8e-05 0.1 13.8 0.6 33 59 92 118 91 123 0.88

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACAGTGCCCAACAACTACCTGGCTATGGAGGCGGTCGAGGAGATGGAGACCAAGGTTGTGGTAGACCTGCCGTCTCCCGCCCCCTCGAGGAAGCGCCGCCTGGACCACTTAACATGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAACCGCGTAGCGGCTCAGACTTCGCGCGACAGGAAGAAGGCGAAGATGGATGAGATGGAGGACCGCATCAAATACTTTATGGATATGAATGAGAAGTTGACCAGTGAGGTGGAGAGCTTGAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGTgaagcggcggcggcgcggacCGTCGCGGAGGCCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCAGACGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTTCTTCAGGAACGCCTCAAAATGACACAGTCAGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCGCAGCAAAGCACCTGGAATCCAGTGAAAGTTCAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEEMETKVVVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNEKLTSEVESLKALNERLLSENATLRSEAAAARTVAEAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTSIQTSTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPVKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-