Mbra009197.1
Basic Information
- Insect
- Mamestra brassicae
- Gene Symbol
- Xbp1
- Assembly
- GCA_905163435.1
- Location
- LR990994.1:16867776-16869401[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.6 1.1e+04 -2.8 0.0 17 25 34 42 32 43 0.71 2 3 3.5e-18 4.1e-15 56.3 4.7 2 52 47 97 47 99 0.97 3 3 6.3e-05 0.074 13.8 0.6 33 59 92 118 91 123 0.88
Sequence Information
- Coding Sequence
- ATGAGCGCTCCTATAATCATCACGGTGCCCAACAATTACCTGGCAATGGAGGCGGTCGAGGAGATGGAGTCCAAAGTGATAGTAGACCTGCCATCTCCCGCGCCCTCCAGGAAGCGCCGACTGGACCACTTAACGTGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAAAACCGCGTAGCGGCTCAGACTTCGCGCGACAGGAAAAAGGCGAAAATGGATGAGATGGAGGACCGCATCAAATACTTTATGGACATGAATGAGAAGTTGACAAGTGAGGTGGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGCgaagcggcggcggcgcggacCGTCGCGGAGGCCCCCAGACCAGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGCCGGCGATCCGCGCGgtgcgcctgctgctggcgatGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCCGACGAGTACCTTGACACCCTTACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTACTGCAGGAACGCCTCAAAATGACACAGTCAGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCAGTGGAGGTGCAGTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLAMEAVEEMESKVIVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNEKLTSEVESLKALNERLLSENATLRSEAAAARTVAEAPRPAESIPQQKEGPPPAIRAVRLLLAMCLLSQTSSHTSIPTSTLTPLLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPVEVQS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_00667100;
- 80% Identity
- iTF_00952446;