Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947578425.1
Location
OX387966.1:18299500-18301277[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.1 1e+04 -2.8 0.0 17 25 34 42 32 43 0.71
2 3 7.4e-18 9.4e-15 55.0 7.0 2 53 47 98 47 103 0.94
3 3 1e-05 0.013 16.1 0.5 30 58 89 117 89 121 0.90

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTGCCCAACAACTACCTGGCTATGGAAGCGGTTGAGGAGATGGAGACCAAGGTGGTGGTAGACCTGCCGTCTCCCGCTCCCTCGAGGAAGCGCCGCCTGGACCACTTATCATGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACTTCGCGCGACAGGAAAAAGGCGAAGATGGATGAGATGGAAGACCGCATCAAATACTTTATGGATATGAATGAGAAGTTGACCAGTGAGGTAGAGAGCTTGAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGTGAAGCGGCGGCGGCGCGGAGCGTCGCGGGGGCCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCAGACGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTTCAGGAACGCCTCAAAATGACACAGTCAGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCCCAGCAAAGCACCTGGAATCCAATGAAAGTTCAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEEMETKVVVDLPSPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNEKLTSEVESLKALNERLLSENATLRSEAAAARSVAGAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTSIQTSTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPMKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-