Basic Information

Gene Symbol
Xbp1
Assembly
GCA_905147715.1
Location
LR990647.1:26611304-26612902[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.5 2.8e+04 -2.8 0.0 17 25 34 42 32 43 0.71
2 3 7.9e-18 2.6e-14 55.0 8.3 2 53 47 98 47 103 0.94
3 3 7e-05 0.23 13.5 0.6 33 57 92 116 91 121 0.89

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTGCCTAACAACTACCTGGCTATGGAGGCGGTCGAGGAGTTGGAGACGAAGGTGGTGGTAGACCTGCCGTCTCCCGCTCCGTCGAGGAAGCGCCGCCTGGACCACTTATCATGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACTTCGCGCGACAGGAAGAAGGCAAAGATGGATGAGATGGAAGACCGCATCAAATACTTTATGGATAAGAATGAGAAGTTGACCAGTGAGGTGGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGTGAGAACGCAACGCTTCGCAGTgaagcggcggcggcgcggacCGTCGCGGGGGCCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCAGACGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTTCAGGAACGCCTCAAAATGACACAGTCAGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCGCAGCAAAGCACCTGGAATCCTGTGAAAGTTCAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEELETKVVVDLPSPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDKNEKLTSEVESLKALNERLLSENATLRSEAAAARTVAGAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTSIQTSTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPVKVQS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-