Basic Information

Gene Symbol
Xbp1
Assembly
GCA_905333075.2
Location
HG995378.1:26551024-26552732[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.3 2.4e+04 -2.8 0.0 17 25 34 42 32 43 0.71
2 3 8.4e-18 2.2e-14 55.0 7.0 2 53 47 98 47 103 0.94
3 3 1.2e-05 0.032 16.0 0.6 30 58 89 117 89 121 0.90

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTGCCTAACAACTACCTGGCTATGGAGGCGGTTGAGGAGATGGAGTCAGGCGTGCTGGTGGACCTGCCATCTCCCGCCCCCTCCAGGAAGCGCCGGCTGGACCACTTGACATGGGAGGAGAAGATGCAAAGGAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACTTCGCGAGACAGGAAGAAGGCAAAGATGGATGAGATGGAGGACCGCATCAAATACTTTATGGATATGAATGAAAAGTTGACAAGTGAGGTAGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGCgaagcggcggcggcgcggaACGTCGCGGGGGCCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTAGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCAGACGAGTATCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTGCAGGAACGCCTCAAAAtGACACAATCAGCAAAACTGGAGAGTGCATTAAAGGACCTAAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCAGTGAAGGTGCAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEEMESGVLVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNEKLTSEVESLKALNERLLSENATLRSEAAAARNVAGAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTSIQTSISIPSLNLQTPSSKKLMQVLQERLKMTQSAKLESALKDLKWWGPQQSTWNPVKVQS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-