Pneb024913.1
Basic Information
- Insect
- Polia nebulosa
- Gene Symbol
- Xbp1
- Assembly
- GCA_951329385.1
- Location
- OX589597.1:5599027-5600617[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-18 9.1e-15 56.3 4.9 2 52 47 97 47 100 0.97 2 2 0.0001 0.16 13.8 0.6 33 59 92 118 91 123 0.88
Sequence Information
- Coding Sequence
- ATGAGCGCTCCTATAATCATCACGGTGCCCAACAACTACCTGGCGATGGAGGCGGTCGAGGAGATGGAGTCCAAGGTGATAGTGGACCTGCCATCCCCCGCCCCCTCCAGGAAGCGCCGCCTGGACCACTTGACGTGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACATCGCGCGACAGGAAAAAGGCGAAAATGGATGAGATGGAGGACCGCATCAAATACTTTATGGACATGAATGAGAAGTTGACAAGTGAGGTGGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGCgaagcggcggcggcgcggacCGTCGCGGAGGCCCCCAGACCAGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCTCCGTCGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCCGACGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAAGTTCTGCAGGAACGCCTCAAAATGACACAGTCAGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCACAACAAAGCACCTGGAATCCAGTGAAAGTGCTATCATAG
- Protein Sequence
- MSAPIIITVPNNYLAMEAVEEMESKVIVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNEKLTSEVESLKALNERLLSENATLRSEAAAARTVAEAPRPAESIPQQKEGPPSAIRAARLLLAMCLLSQTSSHTSIPTSTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPVKVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_00667100;
- 80% Identity
- -