Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963082945.1
Location
OY720384.1:18662321-18663882[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.9 3.3e+03 -0.6 0.1 15 25 32 42 32 43 0.82
2 3 7e-18 1.2e-14 55.2 6.2 2 52 47 97 47 101 0.96
3 3 3.8e-06 0.0068 17.6 1.4 28 59 87 118 86 122 0.90

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTGCCCAACAACTACCTGGCAATGGAGGCGGTCGAGGAGATGGAGACCAAGGTGGTGGTAGACCTGCCATCTCCCGCTACCTCGCGGAAGCGCCGCCTGGACCACTTAACATGGGAGGAAAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACTTCGCGCGACAGGAAGAAGGCGAAGATGGATGAAATGGAGGACCGCATCAAATACTTTATGGATATGAATGAGAAGTTGACCAGTGAGGTAGAGAGTTTGAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGTGaagcggcggcggcgcggagcGTCGCGGTGGCCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCTCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCAGACGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTTCAGGAACGCCTCAAAATgaCACAGTCAGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCGCAGCAAAGCACTTGGAATCCAGTGAAAGTGCAGTGGTAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEEMETKVVVDLPSPATSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNEKLTSEVESLKALNERLLSENATLRSEAAAARSVAVAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTSIQTSTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPVKVQW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-