Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947568875.1
Location
OX387654.1:4466519-4468160[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.9 1.2e+04 -2.8 0.0 17 25 34 42 32 43 0.71
2 3 8.9e-18 1.2e-14 54.9 7.5 2 58 47 103 47 105 0.93
3 3 0.0013 1.7 9.5 0.6 34 55 93 114 93 123 0.85

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTGCCTAACAACTACCTGGCTATGGAGGCGCTTGAGGAGATGGATTCCAAGGTGCTGGTTGACCTACCATCTCCCGCTCCCTCCAGGAAGCGCCGCCTGGACCACTTGTCATGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACTTCGCGTGACAGGAAGAAGGCGAAGATGGATGAAATGGAGGATCGGATCAAATACTTTATGGACATGAATGAGAAGTTGACAAGTGAGGTGAAGAGCTTGAAGGCGTTGAACGAGCGTCTATTGAGCGAGAACGCAACGCTTCGCAGCGAAGCGGTGGCGGCGCGGAACGTCGCGGAGGCCCCCAGACCAGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCGCACACTTCGATTCAGATGAGTACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTGCAGGAACGCCTCAAAATGACACAATCGGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCGAAGCAGAGCACCTGGAATCCAGTGAAGGTGGAGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAMEALEEMDSKVLVDLPSPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNEKLTSEVKSLKALNERLLSENATLRSEAVAARNVAEAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTSIQMSTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPKQSTWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-