Basic Information

Gene Symbol
Xbp1
Assembly
GCA_905332915.1
Location
HG995296.1:18287559-18289967[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.1 1.4e+04 -2.8 0.0 17 25 31 39 29 40 0.71
2 3 8.9e-18 1.4e-14 54.9 6.3 2 52 44 94 44 97 0.97
3 3 6e-05 0.092 13.8 0.7 33 59 89 115 88 120 0.88

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATTATCACGGTGCCCAACAACTACCTGGCTGTGGAGGAGATGGAGTCCAAAGTGATAGTGGACCTGCCCTCTCCTGCGCCCTCCAGGAAGCGCCGCCTGGATCACTTGACGTGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAAAACCGCGTCGCAGCTCAGACTTCGCGCGACAGGAAAAAGGCAAAAATGGATGAGATGGAGGATCGCATCAAATACTTTATGAAGATGAATGAGAAGTTGACGAGCGAGGTTGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGTgaagcggcggcggcgcggacCGTCGCGGAGGCCCCCAGACCAGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGTCGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTTTCTCCTCTCGCAGACCTCCTCGCACACTTCGATTCCGAAGAATACCTCGACACCCTCAATCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTACTGCAGGAACGCCTCAAAATGACACAGTCGGCAAAACTGGAGAATGCATTGAAGGACCTAAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCAGTGGAAGTGCAGTCCTAG
Protein Sequence
MSAPIIITVPNNYLAVEEMESKVIVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMKMNEKLTSEVESLKALNERLLSENATLRSEAAAARTVAEAPRPAESIPQQKEGPPSAIRAARLLLAMFLLSQTSSHTSIPKNTSTPSINLQTPSSKKLMQVLQERLKMTQSAKLENALKDLKWWGPQQSTWNPVEVQS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-