Basic Information

Gene Symbol
Xbp1
Assembly
GCA_941860345.1
Location
OW796095.1:12464667-12465575[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.5 7e+03 -2.6 0.0 17 25 34 42 32 43 0.71
2 3 6.7e-19 6.3e-16 58.4 5.5 2 52 47 97 47 99 0.97
3 3 1.2e-05 0.011 16.0 0.6 32 59 91 118 90 123 0.88

Sequence Information

Coding Sequence
ATGAGCGCACCTATAATCATCACTGTGCCCAACAACTACCTGGCGATGGAGGCGGTCGAGGAGATGGAGTCAAAGGTCGTGGTAGACCTGCCGTCCCCGGCACCCTCCAGGAAGCGCCGCCTGGACCATCTCACATGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGAGTAGCGGCTCAGACTTCCCGGGACAGGAAAAAGGCAAAGATGGATGAAATGGAGAGTCGCATCAAACACTTTATGGACATGAACGAGCGGCTGACGAGTGAGGTGGAGAGTTTGAAGGCGTTGAACGAGCGTCTATTGAGCGAGAACGCATCGCTTCGCAGCGAAGCGGCCGCGGCGCGGACCGTCGCGGAGGCCCCCAGACCAGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCTCCGCAGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCGCACACTTCGACTCTGAAGAGTACCTCGACACCCTCACTCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTGCTGCAGGAACGCCTCAAAATGTAA
Protein Sequence
MSAPIIITVPNNYLAMEAVEEMESKVVVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKHFMDMNERLTSEVESLKALNERLLSENASLRSEAAAARTVAEAPRPAESIPQQKEGPPQAIRAARLLLAMCLLSQTSSHTSTLKSTSTPSLNLQTPSSKKLMQVLQERLKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00667100;
80% Identity
-