Lnic007549.1
Basic Information
- Insect
- Luperina nickerlii
- Gene Symbol
- Xbp1
- Assembly
- GCA_963855955.1
- Location
- OY979666.1:20563688-20565734[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.9 1.6e+04 -2.8 0.0 17 25 34 42 32 43 0.71 2 3 5.4e-18 9.7e-15 55.5 4.2 2 52 47 97 47 99 0.97 3 3 1.2e-05 0.021 16.0 0.6 30 58 89 117 89 121 0.90
Sequence Information
- Coding Sequence
- ATGAGCGCTCCTATAATCATCACGGTGCCTAACAACTACCTGGCTATGGAGGCGGTTGAGGAGATGGAGTCCAAGGTGCTGGTGGAACTGCCATCTCCTGCCCCCTCCAGGAAGCGCCGCTTGGACCACTTGTCATGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTAGCGGCTCAGACGTCACGCGACAGGAAGAAGGCAAAGATGGATGAGATGGAAGACCGCATCAAATACTTTATGGATATGAATGACAAGTTGACAAGTGAGGTGGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAACGCAACGCTTCGCAGTGAAGCGGCCGCGGCGCGGAACGTCGCGGGGACCCCCAGACCGGCAGAGTCTATTCCTCAGCAGAAGGAAGGGTCCCCGATGGCGATCCGCGCGGCGCGCCTACTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCCCACTTCGATTCAGAAGAATACCTCGATACCCTCACTCAACTTGCAGACTCCCTCTTCAAAGAAATTGATGCAAGTGCTGCAGGAACGCCTCAAAATGACACAATCAGGAAAACTGGAGAGTGCATTGAAGGACCTAAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCAGTGAAGGTGCAGTCATAG
- Protein Sequence
- MSAPIIITVPNNYLAMEAVEEMESKVLVELPSPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKYFMDMNDKLTSEVESLKALNERLLSENATLRSEAAAARNVAGTPRPAESIPQQKEGSPMAIRAARLLLAMCLLSQTSSPTSIQKNTSIPSLNLQTPSSKKLMQVLQERLKMTQSGKLESALKDLKWWGPQQSTWNPVKVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_00667100;
- 80% Identity
- -