Clig029378.1
Basic Information
- Insect
- Craniophora ligustri
- Gene Symbol
- Xbp1
- Assembly
- GCA_905163465.1
- Location
- LR990958.1:13987755-13989294[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 1.7e+03 -0.2 0.3 28 46 20 32 16 45 0.45 2 3 3.8e-18 3.9e-15 56.3 4.4 2 52 47 97 46 99 0.97 3 3 2e-06 0.0021 18.7 1.5 28 59 87 118 86 122 0.90
Sequence Information
- Coding Sequence
- ATGAGTTCTCCTATAATCATCACAGTGCCCAACAACTACCTGGCCATGGAGGCGGTTGAGGAGTTGGAGTCGAAGGTGGTGGTAGACCTGCAGTCTCCCATATCCTCAAGGAAGCGCCGATTGGACCACCTGACATGGGAGGAAAAGATGCAAAGAAAGAAACTGAAGAACCGGGTAGCTGCTCAGACATCGCGCGACAGGAAGAAGGCGAAAATGGATGAGATGGAGGGTCGGATCAAATACTTCATGGACATGAACGAGCGGTTGACGAGTGAGGTGGAGAGCTTGAAGGCGTTGAACGAGCGTCTGTTGAGCGAGAATGCTTCGTTGCGCAGCGAAGCGGCGGCGGCGCGGAGCGTCGCGGTGGCCCCCAGACCAGCAGAGTCTATTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGGCACGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTTGACTCAGAAGAGTACCTCGATACCCTCACTCAACTCGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTGTTGCAGGAACGCCTCAAAATGACTCAGTCAGGAAAGCTGGAGAGTGCCCTGAAGGAGCTAAAGTGGTGGGGCCCACAGCAGAGCACCTGGAATCCAGTGAAGGTGCAATCGTAG
- Protein Sequence
- MSSPIIITVPNNYLAMEAVEELESKVVVDLQSPISSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEGRIKYFMDMNERLTSEVESLKALNERLLSENASLRSEAAAARSVAVAPRPAESIPQQKEGPPTAIRAARLLLAMCLLSQTSSHTLTQKSTSIPSLNSQTPSSKKLMQVLQERLKMTQSGKLESALKELKWWGPQQSTWNPVKVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_00667100;
- 80% Identity
- -