Dnig014114.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nigromelanica
Gene Symbol
SMARCC2
Assembly
GCA_004149445.1
Location
SCDR01000212.1:245053-250155[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7 3e+03 -1.0 0.1 34 43 203 212 202 214 0.85
2 2 8.2e-15 1.5e-11 44.8 0.2 3 44 657 698 655 700 0.95

Sequence Information

Coding Sequence
ATGAACACACTTGGTCCTAAAAAGGACGGCAGTCCTAACATTGACTTTTTCCAGTCGCCAGAGACGCTGCAGGGCTTCGAGTCCATTCGACAATGGCTACAAAAGAATTGTAAAAAGTACTTGGCGCACAGCTCGGAGCCAATAACAAAGGAATCGCTTGCACAGCTACTTATATTATTTCTGCAATATGTGGAGGCGAAATTGGGCAAAAACTCGGCCGATCCACCGGCGACGAGAATCCCGATGCGTTGTTTTTTGGATTTCAAAAACGGCGGAGGTCTCTGCATAATTTTCTCCACAATGTTTCGTTTTCGGGCTGAGCAGCgtggcaaaaaatttgacttttCGATTGGCAAGAATCCTACCCGGAAGGATCCCAACATCCAATTGCTGATTGAGATCGAACAAGCGCTCGTGGAGGCAGATCTCTATCGCATACCCTACATCTATATCCGACCGGAGATTGAGAAGAGCTTCGAGGCGCGTCTGCGTGAAATTCTTGACAATCGAAGGGTGGAAATCGTCACCGATGAAGAAGATGCCACGCACATTGTCTATCCCGTGGTGGATCCACATCCCGATGAATATGCTCGTCCCATTTTCAAGCGTGGCAATCATGTTATGCTTCATTGGTACTACTTTCCTGAGTCCTACGATTCATGGACGGTGAATAGCTTTGATTTACCGGATAATATACCCGAGAATCCGGAGTCGCCAGCGGAACGTTGGCGGGTTGCTGCGTCTTGGATTTTGGATCTGGAGCAGTACAACGAATGGATGGCGGAGGAGGACTATGAGGTGGATGAGTTGGGCAAGAAAAAGACGCACAAGCAGCGCATGTCTATCGACGATATCATGTCCTTTGGCGACGATAAAAAGAAGCCAACCACAAGCACAAGTGGCACCGGCAAGCAGAAGCGACGTCGCTCCCCGTCGCCCACAACTTCAACGTCCACATCGAAGCCGGGAAAGCGAAAGCGCTCCCCAGCAGTCATACACAAGAAATCGCGtaacgatgacgatgatgaagaTCTTACACGGGAGCTCGATGATCCGCCGGCTGAGCCCAACATCCAGGAAGTACATAAGACGACGCATTCGGCACTCCAATCGACAGCCAGCCCAGCACCCGGCGGCAAATCACGTGGTGACAACGATATGATGCCCATTAAAGGTGGCACCATGACCGATCTGGACGATGAAATGACTGGCGGCAGTGCTGCCCAGGCGCTGTCCACCGGCGACGGCGACAATTCGCAAACGGGCAAGaccagcgacaacagcaatacCCAGGAGTTCTCATCCTCGGCCAAGGAAGACATGGAGGACAACGTCACTGAGCAAACCCATCACATAATTGTGCCCTCATATTCGGCCTGGTTTGACTACAACTCAATTCATGTCATCGAAAAACGCGCCATGCCCGAGTTTTTCAACAGTAAGAACAAATCGAAGACGCCAGAGATTTACATGGCCTATCGCAACTTTATGATTGACACATACAGGTTAAATCCCACAGAGTACTTGACCAGTACTGCTTGTCGTCGCAATTTGGCAGGCGACGTGTGCGCCATAATGCGCGTTCACGCGTTCCTAGAACAGTGGGGTCTCATCAACTATCAAATTGATGCTGATTTGCGTCCCACGCCAATGGGCCCGCCGCCCACTTCGCACTTTCACATACTCTCGGATACGCCATCTGGCTTGCAGGCAATCAATCCGCAGAAGACGCAGCAACCGTCGGCAGCCAAGACCCTGCTCGATCTCGACAAGAAACCGCTCAGCAAAGAGGCTGGAGGCGTGGATGGCGATAAGAACGCTGGCGGCTTGGGCATCAAAACAGAGACACTGGAGAATGGCGCCGCCAGCGGGCTGGCCTCTGGGGTCAGTCAATTTGGCCTAAAGCTGGATCAGTATGCCAAGAAACCGGCGGCAATGAAGAATCGTACAGCGGCCAGCATGTCGCGCGAGTGGACCGACCAAGAGACACTGCTGTTGCTCGAGGGCCTCGAGATGCACAAGGACGACTGGAACAAGGTGTGCGAGCATGTGGGCACACGCACCCAGGACGAGTGCATTTTACACTTTCTGCGGCTGCCCATCGAGGATCCGTACCTTGAAGACGATGGCGGCTTCCTGGGTCCCCTTGGCTGCCAGCCAATACCGTTTAGCAAGTCCGGCAATCCGATTATGTCAACAGTAGCATTTCTGGCGTCTGTGGTGGATCCGcgtgtcgctgctgccgctgccaaggCTGCCATGGAGGAATTCGCCGCTATCAAGGACGAGGTGCCAGCCACTATTATGGATAACCATATGAAGAACGTGGAGAAGGCCTCGGCCGGCGGCAAATTCAATCCCAACTTTGGTCTGGCCAACAGCGGCATTGCCGGCACTGGCAACGAGAAAGACGATGACGAAGCAAAggaaggcaacaacagcagctccgCGTCGGGCGGCAACGATGAGGAAATGAAGgatattaacaaaaaaggCGACGACGCCAAGTCCAAAGACAAAACGAAATCGGATAAGctcaacacaaacacagactcAAGTtccacatcaacatcaacaacaacaacaactacaacaactagCAACACGCCCACCACCAATAACACAGATAAAAAATCGAAAgattcgtcgtcgtcgttggcCGGCGGcgacaaagccaacaaaaccGACAAAACGAGCAACGCCTCAAACAAAACGGCTTCCAACTCCTCACCCACAGAGACTGGCACCAACAGCGATATTGAGATCAAAACGGAGGATAACAGCGGCGACGGCGAGACCAAGGATGGCAGCAACGATGCCACCAGCGGCGGAGCACCAGCTAAGGAGGGAGCTTTTAGCGAGAACAATATGCAaacagccgctgccgcagcgtTGGCCTCGGCAGCCGTCAAGGCAAAGCACTTGGCAGCGCTGGAGGAGCGCAAGATCAAGTCGCTTGTAGCGTTGCTGGTGGAGACGCAAATGAAGAAGCTGGAAATAAAACTGCGGCATTTTGAGGAGCTGGAGGCAACCATGGAGCGTGAGCGCGAGGGTCTGGAGTACCAACGACAGCAGCTCATCACAGAGCGCCAGCAGTTCCATCTGGAGCAGCTGAAGGCGGCCGAGTTTCGTGCACGCCAGCAGGCGCATCATCGTCTGCAACaagagctgcagcaacagggGCAGGCGGGCGTCGCCCCGGGTGCCATGATACTGccgccacaacagcaacaacagcagccgacaCTACCGCCGCCGCACCATCACCAGCCGCCacaagcgcagcagcagcatccgcaCCAGCCACAGCCCCTGGGTGCACCCTCGGCACAGCATCAACCGCTGCCGACGCACATAGCTCCAGTTGCACCGCCCAACGGTGCACCGTTCGCGCCGCCGCCAGTTGTCCCTCCTGTGGCCGCAGCGCCGCCGGCACCAGCAGGCGAGCTTGCTGCACCTGTGGCGCAACCCCAGCCGCCAACGCCAATGGACACTGCACCGCCAGCTAATGCACCACCTGCTGCCGAAGTCGCCAGCGTGGCTGCAGTTGCGCCCAGCACTGCGCCTGCCCCAAGCATTCCAGCGGCaagcgttgctgctgctgctaatccTCCTCCTTCATCTTAA
Protein Sequence
MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKNSADPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTVNSFDLPDNIPENPESPAERWRVAASWILDLEQYNEWMAEEDYEVDELGKKKTHKQRMSIDDIMSFGDDKKKPTTSTSGTGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDDDDEDLTRELDDPPAEPNIQEVHKTTHSALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLSKEAGGVDGDKNAGGLGIKTETLENGAASGLASGVSQFGLKLDQYAKKPAAMKNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPNFGLANSGIAGTGNEKDDDEAKEGNNSSSASGGNDEEMKDINKKGDDAKSKDKTKSDKLNTNTDSSSTSTSTTTTTTTTSNTPTTNNTDKKSKDSSSSLAGGDKANKTDKTSNASNKTASNSSPTETGTNSDIEIKTEDNSGDGETKDGSNDATSGGAPAKEGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQAGVAPGAMILPPQQQQQQPTLPPPHHHQPPQAQQQHPHQPQPLGAPSAQHQPLPTHIAPVAPPNGAPFAPPPVVPPVAAAPPAPAGELAAPVAQPQPPTPMDTAPPANAPPAAEVASVAAVAPSTAPAPSIPAASVAAAANPPPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00548737; iTF_00585121; iTF_00616833; iTF_00563105; iTF_00335810; iTF_00339079; iTF_00338267; iTF_00472994; iTF_00508258; iTF_00537440; iTF_00562402; iTF_00553670; iTF_01549506; iTF_00525059; iTF_00522102; iTF_01321124; iTF_00530885; iTF_00533733; iTF_00596581; iTF_00539592; iTF_00504620; iTF_00914437; iTF_01554629; iTF_01558966; iTF_00544422; iTF_00584358; iTF_00595878; iTF_00916166; iTF_01319686; iTF_00493575; iTF_00472296; iTF_00506792; iTF_00509032; iTF_00522888; iTF_00527240; iTF_01324040; iTF_00585897; iTF_00593769; iTF_00595177; iTF_00589482; iTF_00538890; iTF_00540298; iTF_00579914; iTF_00805898; iTF_00337451; iTF_00533035; iTF_00545899; iTF_00503922; iTF_00614839; iTF_00567467; iTF_00615499; iTF_00512652; iTF_00586604; iTF_00601708; iTF_01558220; iTF_01551659; iTF_01550928; iTF_01555344; iTF_01548785; iTF_01557492; iTF_01556761; iTF_01550211; iTF_01559692; iTF_00526509; iTF_00534509; iTF_00550189; iTF_00550829; iTF_00475148; iTF_00568909; iTF_00619085; iTF_01323309; iTF_01327821; iTF_00495790; iTF_00541006; iTF_00477952; iTF_00582190; iTF_00917134; iTF_00917135; iTF_01320398; iTF_01322574; iTF_00470799; iTF_00545167; iTF_00572527; iTF_00594479; iTF_00607727; iTF_00557841; iTF_00579217; iTF_00591633; iTF_00509746; iTF_00530194; iTF_00538162; iTF_00556466; iTF_01318963; iTF_00491444; iTF_00519092; iTF_00904692; iTF_00479413; iTF_00549476; iTF_00598082; iTF_00578468; iTF_00476553; iTF_00519849; iTF_00554315; iTF_00532303; iTF_00502453; iTF_00583609; iTF_00536698; iTF_00551515; iTF_00581467; iTF_00488597; iTF_00602517; iTF_00604776; iTF_00608373; iTF_01326325; iTF_00610582; iTF_00802774; iTF_01556056; iTF_00832086; iTF_00571831; iTF_00612745; iTF_00336664; iTF_00569624; iTF_00599512; iTF_01553112; iTF_00490713; iTF_00506041; iTF_00516186; iTF_00805114; iTF_00803532; iTF_01327098; iTF_00478652; iTF_00541692; iTF_00547288; iTF_00559420; iTF_00568182; iTF_00561692; iTF_01325596; iTF_00487229; iTF_00514820; iTF_00580646; iTF_00574742; iTF_00517642; iTF_00603277; iTF_00484375; iTF_00473712; iTF_00600985; iTF_00471546; iTF_00480794; iTF_00487933; iTF_00489309; iTF_00547997; iTF_00566013; iTF_00588765; iTF_00546580; iTF_01321853; iTF_01570173; iTF_00575512; iTF_00528733; iTF_00804318; iTF_00587327; iTF_01324831; iTF_00573248; iTF_00613440; iTF_00485070; iTF_01356064; iTF_00901431; iTF_00492892; iTF_01552384; iTF_01553895;
90% Identity
iTF_00598082;
80% Identity
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