Basic Information

Insect: Drosophila sordidula
Gene Symbol: SMARCC2
Assembly: GCA_035047465.1
Location: JAWNPQ010000029.1:2582854-2587968[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.1 1.9e+03 -1.0 0.1 34 43 203 212 202 214 0.85

2 2 1e-14 9.3e-12 44.8 0.2 3 44 657 698 655 700 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.1	1.9e+03	-1.0	0.1	34	43	203	212	202	214	0.85
2	2	1e-14	9.3e-12	44.8	0.2	3	44	657	698	655	700	0.95

Sequence Information

Coding Sequence: ATGAACACACTCGGTCCTAAAAAGGACGGCAGTCCTAACATTGACTTTTTCCAGTCGCCAGAGACGCTGCAGGGCTTCGAGTCCATTCGACAATGGCTACAAAAGAATTGTAAAAAGTACTTGGCGCACAGCTCGGAGCCAATAACAAAGGAATCGCTTGCACAGCTACTAATACTATTTTTGCAATATGTGGAGGCGAAATTGGGCAAAAACTCGGCCGATCCACCGGCGACGAGAATCCcgATGCGCTGTTTTCTGGACTTCAAGAACGGCGGAGGTCTCTGCATAATTTTTTCCACCATGTTTCGTTTTCGGGCCGAGCAACGCGGCAAGAAATTTGACTTTTCCATTGGCAAGAATCCTACCCGCAAGGATCCCAACATCCAATTGCTAATTGAGATCGAACAGGCGCTCGTTGAGGCAGATCTCTATCGCATACCCTACATCTATATCCGACCGGAGATTGAGAAGAGCTTTGAGGCGCGTCTGCGTGAAATTCTTGACAATCGAAGGGTGGAAATCGTCACCGATGAGGAAGATGCCACGCACATTGTCTATCCCGTGGTGGATCCACATCCCGATGAATATGCTCGTCCCATTTTCAAGCGTGGCAATCATGTGATGCTTCACTGGTACTATTTTCCCGAGTCCTACGATTCATGGACGCTAAATAGCTTTGATTTACCGGATAATATACCTGAGAATCCGGAGTCGCCAGCGGAACGTTGGCGGGTCGCTGCATCTTGGATTTTGGACCTGGAGCAGTACAACGAATGGATGGCGGAGGAGGACTACGAGGTGGATGAGTTGGGCAAGAAGAAGACGCACAAGCAGCGCATGTCTATCGACGACATCATGTCGTTTGGCGACGACAAAAAGAAGCCAACCACAAGCACAAGTGGCACCGGCAAGCAGAAGCGACGTCGCTCACCGTCGCCCACAACTTCAACGTCCACATCGAAGCCGGGCAAGCGAAAGCGCTCCCCGGCAGTCATACACAAGAAGTCgcgcaacgacgacgacgatgaggatCTAACCCGGGATCTCGATGATCCGCCGGCTGAGCCCAACATCCAGGAAGTGCACAAGGCAACCCATTCGGCGCTCCAATCGACAGCCAGCCCAGCACCCGGTGGCAAATCACGTGGTGACAACGATATGATGCCCATTAAAGGAGGCACCATGACCGATCTGGACGATGAAATGACCGGCGGCAGTGCTGCCCAAGCGCTGTCCaccggcgacggcgacaactCGCAAACGGGCAAGaccagcgacaacagcaatacCCAGGAGTTTTCATCCTCGGCCAAGGAAGACATGGAGGACAACGTCACTGAGCAGACCCATCACATAATTGTACCCTCATATTCGGCCTGGTTTGACTACAACTCAATTCATGTCATCGAAAAACGCGCCATGCCCGAGTTTttcaacagcaagaacaaatCGAAGACGCCTGAGATTTACATGGCCTATCGCAATTTTATGATTGACACCTACAGGTTAAATCCCACAGAGTACTTGACCAGCACCGCCTGTCGTCGCAATTTGGCAGGCGACGTGTGCGCCATAATGCGCGTACACGCGTTCCTAGAGCAATGGGGTCTCATCAACTATCAAATTGATGCCGATTTGCGTCCCACGCCGATGGGCCCGCCGCCCACTTCGCACTTTCACATACTCTCCGATACGCCATCTGGCTTGCAGGCAATCAATCCGCAGAAGACACAGCAACCGTCTGCAGCCAAGACACTGCTCGATCTCGACAAGAAGCCGCTGAGCAAGGAGGGTGCTGCCGTCGATTGCGATAAGAGCGCTGGCGGCTTGGGCATCAAGACAGAGACTCTAGAGAATGGCGCCGCCAGCGGCCTGGCATCTGGGGTCAGTCAGTTTGGCCTGAAACTGGATCAGTATGCCAAGAAACCGGCGGCAATGAAGAATCGTACGGCGGCGAGCATGTCGCGTGAGTGGACCGACCAGGAGACGCTTCTTTTGCTCGAGGGTCTCGAGATGCACAAGGACGACTGGAACAAGGTGTGCGAGCATGTGGGTACACGCACACAGGACGAGTGCATCCTGCACTTTCTGCGCCTGCCCATCGAGGATCCGTACCTTGAAGATGATGGTGGCTTCCTGGGACCCCTCGGCTGCCAGCCAATTCCGTTTAGCAAGTCTGGCAATCCAATTATGTCAACGGTAGCATTTCTGGCGTCCGTAGTGGATCCAcgtgtcgctgctgccgctgccaaggCTGCGATGGAGGAATTCGCCGCTATCAAGGACGAGGTGCCAGCCACTATTATGGATAACCATATGAAGAACGTGGAAAAGGCTTCAGCCGGTGGCAAATTCAATCCCAACTTTGGTCTGGCCAACAGCGGCATTGCCGGCACAGGCAACGACAAGGACGATGACGAATCAAAGgagggcaacaacagcagctccaCGTCGGGGGGCAACGATGAGGAAATGAAGGATATTAACAAAAAAGACgACGACGCCAAGTCCAAAGACAAAACGAAATCGGATAAGctcaacacaaacacagactCAAGTTccacatcaacaacaacaaccacatcaacaacagctacaacaacaacagcaacaagcaacacGCCCACCACCAATAACACAGATAAAAAATCGAAAgattcgtcgtcgtcgttggccGGCGGCgacaaagccaacaaaaccGACAAAACGAGCAACGCCTCAAACAAAACGGCTTCCAACTCCTCACCCACAGAGACTGGCACCAACAGCGATGTTGAGATCAAAACGGAGGACaacagcggcgacggcgagaCCAAGGATGGCAGCAACGATGCCACCAGCGCCGGAGCACCAGCTAAGGATGGAGCTTTTAGCGAGAACAATATgcaaacagcagctgctgctgcgttggCCTCGGCAGCTGTCAAGGCGAAGCACTTGGCCGCGCTGGAGGAGCGCAAGATTAAGTCCCTTGTGGCGTTGCTGGTGGAGACACAAATGAAGAAGCTGGAAATCAAACTGCGGCATTTTGAGGAGCTGGAGGCCACCATGGAGCGTGAGCGCGAGGGTCTCGAGTACCAACGACAGCAGCTGATCACAGAGCGCCAGCAGTTCCACCTGGAGCAGCTGAAGGCGGCCGAGTTTCGAGCGCGCCAGCAGGCGCATCATCGCCTCCAACaagagctgcagcaacaggGGCAGGCAGGCGCTGCCGCGGGTGCCATGATACTGccgccacaacagcaacagcagcagcagcagacactgccgccgccgcatcATCACCAGACGGCACAAGTGCAGCATCAACACCAGCCACAGCCGCTGGGTGCACCCTCGGCGCAGCATCAACCGATGCCGACGCATATAGCTGCAGTTGCACCGCCCAACGGTGCACCCTTCGCGGCGCCGCCAGTTGTCCCTCCTGTGGCCGCAGCGCCGCCGGCACCGCCAGGCGAGCTTTCTGCGCCTGTGGCGCAAACCCAACCGCCAACGCCAATGGACACTACACCGCCAGCTAATGCACCACCTGCTGCCGAAGTCGCCAGCGTGGCAGCAGTTGCGCCCAGCACTGCGCCTGCCCCAAGCATTCCAGCGGCaagcgttgctgctgctgctaatccTCCTCCATCATCTTAA
Protein Sequence: MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKNSADPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPDNIPENPESPAERWRVAASWILDLEQYNEWMAEEDYEVDELGKKKTHKQRMSIDDIMSFGDDKKKPTTSTSGTGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDDDDEDLTRDLDDPPAEPNIQEVHKATHSALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLSKEGAAVDCDKSAGGLGIKTETLENGAASGLASGVSQFGLKLDQYAKKPAAMKNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSSSTSGGNDEEMKDINKKDDDAKSKDKTKSDKLNTNTDSSSTSTTTTTSTTATTTTATSNTPTTNNTDKKSKDSSSSLAGGDKANKTDKTSNASNKTASNSSPTETGTNSDVEIKTEDNSGDGETKDGSNDATSAGAPAKDGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQAGAAAGAMILPPQQQQQQQQTLPPPHHHQTAQVQHQHQPQPLGAPSAQHQPMPTHIAAVAPPNGAPFAAPPVVPPVAAAPPAPPGELSAPVAQTQPPTPMDTTPPANAPPAAEVASVAAVAPSTAPAPSIPAASVAAAANPPPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560967;
90% Identity: iTF_00616833; iTF_00563105; iTF_01549506; iTF_01321124; iTF_00530885; iTF_00544422; iTF_00545167; iTF_00493575; iTF_00560967; iTF_00506792; iTF_00583609; iTF_00476553; iTF_00519849; iTF_00572527; iTF_00585897; iTF_00805898; iTF_00567467; iTF_00475148; iTF_00512652; iTF_00601708; iTF_01558220; iTF_01551659; iTF_01550928; iTF_01556761; iTF_01554629; iTF_01553895; iTF_01548785; iTF_01552384; iTF_01555344; iTF_01558966; iTF_01553112; iTF_00526509; iTF_00534509; iTF_00550829; iTF_00568909; iTF_00470799; iTF_01327821; iTF_00495790; iTF_00582190; iTF_01320398; iTF_01322574; iTF_01324040; iTF_01325596; iTF_01321853; iTF_01324831; iTF_00532303; iTF_00509746; iTF_00530194; iTF_00538162; iTF_00546580; iTF_00502453; iTF_00608373; iTF_00557841; iTF_01326325; iTF_00508258; iTF_00802774; iTF_00547288; iTF_00599512; iTF_01556056; iTF_00490713; iTF_00506041; iTF_00516186; iTF_00573248; iTF_00805114; iTF_00803532; iTF_01327098; iTF_00541692; iTF_00559420; iTF_00528733; iTF_00588765;
80% Identity: -