Znig020339.1
Basic Information
- Insect
- Zaprionus nigranus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_018903425.1
- Location
- JAEIGD010000017.1:319491-324026[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.63 8.9e+02 0.4 0.0 33 44 202 213 199 215 0.89 2 3 7.5e-15 1.1e-11 44.9 0.2 3 44 655 696 653 698 0.95 3 3 2.4 3.4e+03 -1.5 0.0 23 40 755 773 753 773 0.91
Sequence Information
- Coding Sequence
- ATGAACACTATAGGTCCTAAAAAGGACGGGAGTCCTAATATTGACTTTTTTCAATCGCCAGAAACACTGCAGGGCTTTGAGTCAATACGACAGTGGCTACAAAAGAATTGTAAAAAGTACTTGGCGCACAGCTCGGAGCCGATAACCAAGGAATCACTTGCACAATTGCTTATATTATTTTTGCAATATGTGGAGGCAAAATTGGGCAAAAACTCGACCGAACCGCCGGCGACGAGAATCCCGATGCGCTGCTTCCTAGATTTTAAGAACGGTGGAGGTCTTTGTATCATTTTCTCTACCATGTTTCGCTTTCGGGCTGAGCAGCGTGGAAAGAAATTTGACTTTTCAATTGGTAAAAACCCCACCCGCAAGGATCCTAATATACAACTGCTGATTGAGATAGAACAAGCGCTGGTGGAAGCTGATCTTTATCGCATACCGTACATTTATATCAGGCCAGAGATTGAGAAAAGTTTTGAAGCTCGTCTTCGGGAAATTCTTGACAATCGAAGAGTGGAAATAGTCACTGATGAGGAAGATGCTACGCACATTGTGTACCCCGTTGTTGATCCTCATCCGGATGAATATGCTCGGCCGATTTTTAGGCGTGGCAATCATGTTATGCTTCACTGGTACTATTTCCCTGAGTCGTATGATTCGTGGACGCCCAATAGCTTTGAGTTGCCGGAAAATATACCCGAGAATCCGGAATCACCGGCGGAACGGTGGCGTGTAGCAGCCTCCTGGATCTTAGACCTGGAGCAGTACAACGAGTGGATGGCTGAAGAGGACTATGAGGTTGATGAGTTGGGCAAAAAGAAGACGCACAAGCAACGCATGTCCATTGATGATATTATGTCTTTTGGGGATGACAAAAAGAAGCCAACCACAAGCGCGGGAACTGGGAAGCAAAAGCGGCGCCGCTCTCCATCGCCAACTACCTCAACATCCACTTCGAAGCCCGGGAAAAGAAAGCGCTCTCCGGCAGTCATACATAAGAAATCACGCAACGACGAAGATGATGAGGATCTTACTCGAGACCTGGACGATCCTCCAGCTGAGCCCAATATTCAGGAGGTACATAAGGCAACGCATTCGGCGCTGCAATCCACTGCCAGCCCAGCACCAGGTGGAAAATCAAGAGCTGACAACGATATGATGCCAATCAAAGGTGGCACCATGACCGATCTCGATGATGAAATGACCGGTGGAAGTGCTGCGCAGGCTTTGTCCACCGGCGACGGTGAGAACTCTCAAACGGGTAAAACTAGCGATAACAGCAATACACAAGAGTTCTCGTCATCGGCCAAGGAGGACATGGAGGACAATGTCACTGAGCAGACGCATCACATTATCGTGCCCTCATATTCGGCCTGGTTCGACTACAACTCGATTCATGTCATCGAGAAACGCGCCATGCCCGAGTTCTTTAATAGCAAGAATAAATCCAAGACCCCAGAGATATACATGGCCTATCGCAACTTTATGATTGATACCTACAGGTTAAATCCTACAGAGTACTTGACCAGCACCGCTTGCAGACGCAATTTAGCCGGCGATGTATGCGCCATAATGCGTGTTCACGCCTTCTTAGAGCAATGGGGTCTCATTAATTATCAAATCGATGCCGATCTGCGACCGACGCCCATGGGACCTCCGCCCACCTCACACTTTCATATACTCTCCGATACCCCGTCTGGTTTGCAAGCGATTAATCCACAGAAGACGCAACAACCATCGGCAGCGAAGACGCTGCTCGATCTTGACAAGAAGCCCTTGGGCAAGGAAGGTGGTGTCGACTGCGACAAAGGTGCAGGTGGTTTGGGTATCAAAACGGAGACATTAGAGAACGGTGCCGCAGGAGGTTTGGCATCAGGAGTTAGTCAGTTTGGCCTCAAACTCGATCAATATGCTAAGAAACCGGCGGCCATGCGTAATCGTACAGCGGCCAGCATGTCGCGTGAGTGGACAGATCAGGAAACACTGCTGCTGCTCGAAGGCCTTGAGATGCACAAAGACGATTGGAACAAGGTTTGCGAGCATGTTGGTACTCGCACCCAGGATGAGTGCATTCTGCACTTCTTGCGTCTACCGATCGAGGATCCGTACCTTGAAGATGATGGCGGTTTTCTAGGTCCGCTTGGCTGTCAGCCAATACCATTTAGCAAATCGGGAAATCCCATTATGTCAACAGTGGCATTTTTGGCATCCGTTGTGGATCCGCGGGTCGCTGCTGCAGCTGCTAAGGCCGCCATGGAGGAATTTGCAGCCATAAAAGATGAGGTGCCAGCTACAATTATGGATAATCATATAAAGAACGTGGAAAAAGCCTCGGCTGGTGGTAAATTTAATCCCAATTTTGGTCTGGCAAACAGCGGCATTGCTGGCACCGGGAATGATAAGGACGATGATGAATCAAAGGAAGGCAACAATAGCAGCTCTACGTCTGCAGCTAATGATGAGGACTCAAAGGATCCAAATAAAAAAGACGACGACGCCAAGTCGAAAGACAAAACGAAATCGGATAAGCTCAACACAAACACAGACTCAAGTTCCACATCAACTTCAACATCATCATCAACAACATCAACAACAACTACAACAGCAATAAGCAACACGCCCACAATCAATAACACCACAGATAAAAAATCTAAAGAGTCGTCCTCTGACAACAAAGCCAACAAAATCGATAAAACGAGCAACGCCTCAAACAAATCAGCTTCCAACTCCTCACCCACAGAGACTGGCACCACAAGCGATGTGGAAATCAAGACAGAGGACAACAGTGGGGATGGCGAGACTAAGGATGGCAGCAACGATACCAGCAGCGGCGGTGCATCGACTAAGGATGGAGCAGGTGGGGCCTTTAGTGAGAACAATATGCAAACGGCTGCAGCTGCAGCGCTTGCCTCGGCAGCGGTTAAGGCGAAACATTTGGCGGCACTCGAGGAGCGTAAGATCAAGTCGCTAGTGGCGTTATTGGTGGAGACACAAATGAAGAAACTGGAAATTAAGCTGCGACACTTTGAGGAGCTCGAGGCCACCATGGAGCGGGAGCGTGAAGGCCTTGAATATCAGCCTGTGGCACCACCCAATGGGGCACCTTTTGCTGGGCCGCCAATTGCTCCACCCGTGGCAGCTGCGCCGCCAGTGTTGGCAATCGAGCAAACTACGCCCGTGTCGCAATCTCAGGCACCGACGCCAATGGATACAACACCGCCAGCTAATGCAACACCTGTTGTTGAGACCGCCAGCGTGGCAGCAGTCGCACCAAGCACTGCGCCAGCTCCAAGCATTCCGGCAACTCCTGTTGCAGCCGCTGTTGCTGCTGCACCTCCTCCTTCATCTTAA
- Protein Sequence
- MNTIGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKNSTEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFRRGNHVMLHWYYFPESYDSWTPNSFELPENIPENPESPAERWRVAASWILDLEQYNEWMAEEDYEVDELGKKKTHKQRMSIDDIMSFGDDKKKPTTSAGTGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDEDDEDLTRDLDDPPAEPNIQEVHKATHSALQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKEGGVDCDKGAGGLGIKTETLENGAAGGLASGVSQFGLKLDQYAKKPAAMRNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHIKNVEKASAGGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSSSTSAANDEDSKDPNKKDDDAKSKDKTKSDKLNTNTDSSSTSTSTSSSTTSTTTTTAISNTPTINNTTDKKSKESSSDNKANKIDKTSNASNKSASNSSPTETGTTSDVEIKTEDNSGDGETKDGSNDTSSGGASTKDGAGGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQPVAPPNGAPFAGPPIAPPVAAAPPVLAIEQTTPVSQSQAPTPMDTTPPANATPVVETASVAAVAPSTAPAPSIPATPVAAAVAAAPPPSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560967;
- 90% Identity
- iTF_00598082;
- 80% Identity
- -