Dnas003362.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nasuta
Gene Symbol
SMARCC2
Assembly
GCA_017165715.1
Location
Scf:120713-129972[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7 1.6e+03 -1.1 0.1 34 43 203 212 202 214 0.85
2 2 8.9e-15 8e-12 44.7 0.2 3 44 658 699 656 701 0.95

Sequence Information

Coding Sequence
ATGAACACATTGGGTCCTAAAAAGGACGGAAGTCCTAATATTGACTTTTTCCAATCGCCAGAGACGCTGCAAGGCTTCGAGTCGATACGCCAATGGCTACAAAAGAATTGTAAAAAGTATTTGGCGCACAGCTCGGAGCCGATTACAAAGGAATCGTTGGCACAATTGCTTATACTATTTCTGCAATATGTAGAAGCAAAATTGGGAAAGAACTCTGCCGAACCGCCGGCGACGAGAATTCCGATGCGGTGTTTTCTTGACTTCAAGCAAGGTGGTGGCCTATGTATCATTTTCTCGACAATGTTTCGCTTCCGCGCCGAACAACGCGGCAAAAAGTTCGACTTTTCTATTGGCAAGAATCCCACACGTAAGGATCCCAACATCCAGCTGTTAATCGAAATCGAACAGGCGCTCGTGGAAGCTGATCTCTATCGCATACCCTACATTTATATTCGGCCTGAGATTGAGAAGTCGTTTGAGTCGCGCCTACGTGAAATTCTCGACAACCGTCGTGTGGAGATTGTTACCGATGAGGAGGATGCCACCCATATTGTCTATCCCGTTGTGGATCCTCATCCGGATGAGTATGCTCGACCCATCTTCAAGCGAGGCAATCATGTGATGTTACATTGGTACTATTTTCCCGAGTCCTACGATTCGTGGACGCTGAATAGCTTCGACTTGCCGGATAATATACCTGAGAATCCGGAATCGCCTGCAGAACGTTGGCGTGTTGCTGCAACTTGGATATTGGATCTGGAGCAGTACAACGAGTGGATGGCTGAAGAGGATTACGAGGTGGATGAGATGGGCAAAAAGAAAACGCACAAGCAGCGCATGTCCATCGACGACATTATGTCGTTTGGAGACGACAAAAAGAAACCTACGGCCAGCAGTGGAACTGGTAAACAAAAGCGTCGTCGCTCCCCTTCGCCCACAACATCCACGTCTACATCGAAACCGGGCAAACGAAAGCGTTCGCCGGCCGTTATCCACAAGAAGTCGCGCAACGATGACGACGACGAGGATCTAACGCGTGATCTAGACGATCCGCCAGCTGAGCCCAACATTCAGGAGGTGCATAAGGCTACCCACTCGGCACTGCAATCAACTGCCAGCCCCGCACCAGGTGGCAAATCACGAGCTGACAACGATATGATGCCCATCAAGGGTGGCACCATGACCGACTTGGATGATGAAATGACAGGCGGCAGCGCTGCCCAGGCAATGTCCACGGGCGATGGCGACAATTCGCAGACGGGCAAGACCAGCGACAACAGCAACACGCAAGAGTTCTCATCGTCGGCCAAAGAGGACATGGAGGACAATGTGACCGAGCAGACTCATCACATTATTGTGCCCTCGTACTCGGCCTGGTTTGACTACAACTCGATTCATGTCATCGAGAAGCGCGCCATGCCCGAGTTCTTCAATAGCAAAAACAAATCGAAGACCCCCGAGATCTACATGGCCTATCGCAACTTTATGATTGACACTTACAGGTTAAATCCCACAGAGTACTTGACCAGCACCGCCTGTCGTCGCAATTTAGCCGGCGATGTGTGCGCTATAATGCGTGTGCACGCCTTCTTAGAGCAGTGGGGTCTGATCAACTACCAGATCGATGCCGATTTGCGTCCCACACCCATGGGACCGCCGCCCACTTCGCACTTTCACATACTATCGGATACGCCGTCAGGTTTGCAGGCAATCAATCCGCAGAAGACGCAACAACCATCGGCAGCCAAGACGCTGCTCGATCTCGACAAGAAGCCACTGGGCAAAGACGCTAGTGGCGTCTTGGAGTGCGACAAGGCTGCTGGTGGATTGGGTGGCATCAAGACGGAAGCACTTGAGAATGGTGCTGCTGGCGGTTTGTCCTCTGGCGTCAGTCAGTTTGGCCTCAAGTTGGATCAGTATGCCAAGAAACCGGCAGCCATGAAGAATCGCACAGCAGCGAGCATGGCACGCGAGTGGACCGATCAGGAAACGCTGCTGCTGCTCGAAGGTCTCGAGATGCACAAAGACGACTGGAATAAGGTGTGCGAACACGTCGGCACACGCACTCAGGACGAGTGCATTTTGCACTTCTTACGTTTACCCATTGAGGATCCTTATCTGGAGGATGATGGCGGTTTCCTTGGCCCACTTGGCTGCCAGCCAATTCCGTTTAGCAAATCTGGCAATCCCATTATGTCGACCGTGGCCTTTTTGGCATCTGTTGTCGACCCACGCGTCGCTGCTGCTGCTGCAAAGGCAGCAATGGAGGAATTTGCCGCCATCAAGGACGAGGTGCCAGCAACCATTATGGATAACCATATGAAGAATGTAGAGAAAGCTTCGTCGGGCGGCAAATTTAATCCAAACTTTGGTCTGGCCAACAGCGGAATTGCCGGCACAGGCAACGACAAGGACGATGACGAGTCGAAGGAGGGCAACAACAGCAGCAGCTCTGCGTCGGTCGCCAATGACGAGGAGATGAAGGATCTAAGCAAGAAAGACGCCACAGATGAGGCAAAGTCCAAAGACAAAACGAAAACGGATAAGCTCAACACAAACACAGACTCCACAAGTTCCACATCAACATCATCAACGACAACAACAACTACATCAGCTACAACAACAACAACGCCCATTACCAATAACACAGATAAAAAATCTAAAGATTCATCGTCGTCGTCGTTGGCCGGCGACAATGACAAAGCCAACAAAACTGAAAAAACGAGCAACGCCTCAAACAAATCGGCTTCCAACTCCTCACCCACAGAGTCTGGCTCCGGCACTGGAGATGTGGAGATCAAAACGGAGGACACAAGCGGCGATGGCGAGACCAAGGATGGCAGCAGCGATGCCAGCAGCGGCGGCGGCGGCACTGTCTCAACAGCTAACAAGGAGGGCGCCTTCAGCGAGAACAACATGCAAACGGCGGCGGCAGCTGCGCTCGCCTCGGCAGCCGTCAAGGCGAAACATTTGGCTGCACTGGAGGAGCGCAAGATCAAGTCACTGGTGGCACTGCTGGTGGAGACACAAATGAAGAAGTTGGAGATCAAGTTGAGGCACTTCGAGGAGCTGGAGGCCACCATGGAACGGGAACGTGAAGGCCTCGAGTATCAGCGACAACAGCTCATTACCGAGCGCCAGCAATTCCATTTGGAGCAGTTGAAGGCTGCAGAGTTCCGAGCACGCCAGCAGGCGCATCATCGCCTGCAACAGGAGCTGCAACAACAGGGCCAAGCAGCCGCTGCCGCCGGATCCATATTGATGCAACCCCAGCAGCAGCAGCAACAACAGCAGCAGCAGCCACAAACCTTACCGCCGCCGGCGCCGCATCATCATCAACAGCAAGCGCCACAATCGGTGGCAGGGCATCCGCATCAGCCGCAGCTGCAGCCGCAACAACTTGCGGCTCCATCAGCGCAACAGCATCAGCCGTTGCCACCGCATATAGCAGCAGCTGGTGCACCGCCCAATGGAGCACCATTCGCGGCGCCGCCAATTGCACCCGCTGTGGTTTCAGCGCCAGCGCCAACAACGGCAGCAGCCGAGCAACCTGTTGCAACTGTGGCACCAGCTCAGGCCACGCCCACGCCCATGGACACTACACCACCAGCTAATGCACCGCCAGTTGCTGTTGCCGATGCTGCTGTTGCTGCCGCCAGCGTGACAACCATTGCTCCAAATGCAGCGCCTGCTCCTAGCATTCCAGCGGCCACTGTAGCTGCAGCTGCTGCACCAGCACCTCCTTCATCTTAA
Protein Sequence
MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKNSAEPPATRIPMRCFLDFKQGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFESRLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPDNIPENPESPAERWRVAATWILDLEQYNEWMAEEDYEVDEMGKKKTHKQRMSIDDIMSFGDDKKKPTASSGTGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDDDDEDLTRDLDDPPAEPNIQEVHKATHSALQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKDASGVLECDKAAGGLGGIKTEALENGAAGGLSSGVSQFGLKLDQYAKKPAAMKNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASSGGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSSSSASVANDEEMKDLSKKDATDEAKSKDKTKTDKLNTNTDSTSSTSTSSTTTTTTSATTTTTPITNNTDKKSKDSSSSSLAGDNDKANKTEKTSNASNKSASNSSPTESGSGTGDVEIKTEDTSGDGETKDGSSDASSGGGGTVSTANKEGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQAAAAAGSILMQPQQQQQQQQQQPQTLPPPAPHHHQQQAPQSVAGHPHQPQLQPQQLAAPSAQQHQPLPPHIAAAGAPPNGAPFAAPPIAPAVVSAPAPTTAAAEQPVATVAPAQATPTPMDTTPPANAPPVAVADAAVAAASVTTIAPNAAPAPSIPAATVAAAAAPAPPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00560967;
90% Identity
iTF_00562402; iTF_00614119; iTF_00472296; iTF_00509032; iTF_00595177; iTF_00589482; iTF_00579217; iTF_00520561; iTF_00556466;
80% Identity
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