Dmim013508.1
Basic Information
- Insect
- Drosophila mimica
- Gene Symbol
- SMARCC2
- Assembly
- GCA_037043585.1
- Location
- JBAMBE010001187.1:10207731-10212969[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 2e+03 -1.1 0.1 34 43 203 212 202 214 0.85 2 2 9.2e-15 9.9e-12 44.7 0.2 3 44 672 713 670 715 0.95
Sequence Information
- Coding Sequence
- ATGAACACACTCGGTCCTAAAAAGGATGGAAGTCCCAACATTGACTTTTTCCAATCGCCAGAGACGCTTCAAGGCTTTGAGTCTATACGACAATGGCTACAAAAGAATTGTAAAAAGTATTTGGCGCACAGCTCGGAACCGATCACAAAGGAGTCGCTTGCCCAACTGCTAATACTTTTTCTGCAATATGTGGAGGCGAAATTGGGCAAAACCTCTGCTGAACCGCCGGCGACGAGAATCCcgATGCGCTGTTTTCTGGATTTTAAAAACGGTGGTGGTCTGTGCATAATTTTCTCGACCATGTTTCGCTTTCGAGCCGAGCAACGTGGAAAAAAATTCGACTTTTCCATTGGCAAGAACCCGACACGCAAAGATCCTAACATACAATTGCTGATTGAGATCGAGCAGGCACTCGTCGAGGCCGATCTCTATCGCATACCCTACATCTACATCAGGCCAGAGATTGAGAAGAGTTTTGAAGCGCGTCTTCGTGAGATTCTCGACAATCGACGCGTGGAAATCGTCACGGATGAGGAGGATGCGACGCACATTGTCTATCCTGTTGTGGATCCACATCCCGATGAGTACGCTCGTCCCATTTTTAAGCGTGGCAATCATGTCATGCTCCACTGGTACTATTTTCCCGAATCCTATGACTCGTGGACTCTAAATAGCTTCGATTTGCCGGACAATATACCGGAGAATCCGGAATCACCGGCGGAACGCTGGCGAGTCGCCGCCTCTTGGATATTGGATCTAGAGCAGTATAACGAGTGGATGACGGAGGATGATTACGAAGTTGATGAGCAGGGTAAAAAGAAGATGCATAAGCAACGCATGTCCATCGATGACATCATGTCCTTTGGCGATGACAAAAAGAAGCCAACCAccactagcagcagcagcggtggtGGCACCACTGGCAAACAGAAGCGACGACGCTCGCCATCGCCCACAACGTCTacatccacatcgacatcgaAGCCGGGCAAGCGAAAGCGCTCCCCGGCCGTCATACACAAGAAGTTgcgcaacgacgacgacgacgaagatcTTACCCGCGATCTGGACGATCCGCCGGCTGAGCCCAATATACAAGAGGTGCATAAGGCAACACATTCGACGCTACAATCGACAGCCAGCCCAGCGCCAGGTGGCAAATCCCGTGGCGACAACGATATGATGCCCATCAAAGGTGGCACCATGACCGATTTGGATGATGAAATGACTGGTGGCAGTGGCGCTCAAGCTCTGTCCACCGGTGACGGGGACAATTCGCAGACAGGCAAGACAAGCGATAATAGTAATACGCAAGAGTTTTCATCTTCGGCCAAGGAGGACATGGAGGACAATGTGACCGAGCAAACGCATCACATCATCGTACCCTCATATTCGGCCTGGTTCGATTACAACTCAATTCATGTGATTGAGAAGCGCGCCATGCCCGAATTCttcaacagcaagaacaaatCGAAAACGCCTGAAATTTACATGGCCTATCGCAACTTTATGATTGACACTTACAGGTTGAATCCCACAGAGTACTTGACCAGCACCGCTTGCCGTCGGAATTTGGCCGGCGATGTGTGCGCCATAATGCGTGTGCACGCCTTCCTTGAACAATGGGGTCTCATCAACTATCAGATCGATGCCGATTTGCGACCTACGCCAATGGGGCCGCCACCCACATCGCACTTTCACATATTGTCGGACACGCCGTCTGGCTTGCAGGCGATCAATCCGCAGAAGACACAGCAGCCATCAGCGGCTAAGACACTGCTTGATCTGGACAAGAAGCCGCTTGGAAAGGAGGGTGGCGTCATGGAGTGTGATAAGGGCGCTGGCGCAGGCGGCACCGGCGTTGGGAGTGGCTTGGGCATTAAGACAGAGACGCTGGAGAATGGCGCCCCCAGCGGTTTGGCTTCTGGGGTCAGTCAATTTGGTCTGAAGTTGGATCAGTATGCCAAGAAGCCGGCGGCAATGAGGAATCGCACGGCGGCGAGCATGTCGCGCGAGTGGACCGACCAGGAGACACTACTGCTGCTGGAGGGACTCGAGATGCACAAGGACGACTGGAATAAGGTGTGCGAACATGTCGGCACACGTACCCAGGACGAGTGCATTCTGCACTTTTTGCGGCTGCCCATAGAGGACCCGTATTTGGAGGATGATGGCGGCTTCCTGGGTCCGCTTGGCTGCCAGCCAATTCCATTTAGCAAATCCGGCAATCCCATCATGTCAACAGTCGCATTTCTCGCATCAGTCGTGGATCCGCgcgtcgcagctgctgctgccaaggCAGCTATGGAAGAGTTTGCCGCGATTAAAGATGAGGTGCCAGCCACCATTATGGACAACCATATGAAGAACGTAGAGAAGGCCTCGGCCGGCGGCAAATTCAATCCCAATTTCGGTCTGGCCAACAGCGGCATTGCTGGCACAGGCAATGACAAGGACGACGACGAATCCAAggatggcaacaacagcagctcctCAGCACCTTGCCACGATGAGGAAATGAAGGATCTTAACAAAAAAGAcgACGACGCCAAGTCCAAAGACAAAACGAAAACGGATAAGCTCAACACAAACACCACAGACTTAAGTtccacatcaacaacatcaaccacATCAGCcacatcaacaataacaacaacaacagctacaacaacagcaacaacaacaacaagcaacacgCCCACCACCAATAACACTGATAAAAAACCTAAAGATTCAGGCGGcgacaaagccaacaaaacaaGCGACAACAAACCGAGCACCAACAACGCCTCAAACAAAACGGCTTCCAACTCCTCACCCACAGAGACTGGCACTACCAACAGCGATGTTGAGATCAAAACGGATGACAACAGCGGCGATGGCGAGTCCAAGGATGCCAGCAACGATGCCAGTGGCGGCGGCAGTGCCTCCGCGAAGGACGGTGTAGGCGCCTTCAGCGAGAACAATATGCAAACGGCCGCGGCGGCTGCTCTGGCCTCGGCTGCCGTCAAGGCCAAACATTTGGCGGCATTGGAGGAGCGTAAGATCAAGTCTCTGGTCGCACTGCTCGTGGAGACGCAAATGAAGAAGCTGGAGATTAAGCTGCGGCACTTTGAGGAACTGGAGGCGACCATGGAGCGTGAACGCGAGGGTCTCGAATACCAGCGACAGCAGCTCATCACCGAGCGCCAGCAGTTCCATCTGGAACAGCTTAAGGCGGCTGAGTTCCGAGCACGTCAACAGGCGCATCACCGTCTGCAACAGGAGCTACAACAGCAGGGACAGCAGGCGGCGGGCGCACCCGTTCCGGGTGTAATGGTCTTGCCGCCGCAACAGCAGGCGGcacagcaccaacagcagcagtcactgccaccgccgccgccccatcaccaccagcagcagcagccgccgccgccgcaacAACAAGCGCTGCCACAGCAGTTGCAGAATCAGCCACAAACGCTGGCAGCACCTTCAGCGCAGCATCAGCCGTTGCCACCGCACATAACTGCAGTTGCACCGCCGAACGGTGCACCATTTGCAGCGCCGCCAGTTGCGGTGCCATCCGCGGCCGCAGCGCCGCCGCCAGCTGTTGGCGAGCTTCCGCCCGCAGCTGTGGCCCAAGCTCAGGCGCCCACGCCGATGGACACTACATCGCCAGCTAATGCAGCGCCGGTTGGTGAAGTCTCCGGCGTGGCAGCTGTTGCGGCAAGTGCTGCGCCTGCCCCAAGCATTCCGGTGGCAAgcgttgccgctgctgtcaATCCTCCTCCTTCAACTTAA
- Protein Sequence
- MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKTSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPDNIPENPESPAERWRVAASWILDLEQYNEWMTEDDYEVDEQGKKKMHKQRMSIDDIMSFGDDKKKPTTTSSSSGGGTTGKQKRRRSPSPTTSTSTSTSKPGKRKRSPAVIHKKLRNDDDDEDLTRDLDDPPAEPNIQEVHKATHSTLQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSGAQALSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKEGGVMECDKGAGAGGTGVGSGLGIKTETLENGAPSGLASGVSQFGLKLDQYAKKPAAMRNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPNFGLANSGIAGTGNDKDDDESKDGNNSSSSAPCHDEEMKDLNKKDDDAKSKDKTKTDKLNTNTTDLSSTSTTSTTSATSTITTTTATTTATTTTSNTPTTNNTDKKPKDSGGDKANKTSDNKPSTNNASNKTASNSSPTETGTTNSDVEIKTDDNSGDGESKDASNDASGGGSASAKDGVGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQQAAGAPVPGVMVLPPQQQAAQHQQQQSLPPPPPHHHQQQQPPPPQQQALPQQLQNQPQTLAAPSAQHQPLPPHITAVAPPNGAPFAAPPVAVPSAAAAPPPAVGELPPAAVAQAQAPTPMDTTSPANAAPVGEVSGVAAVAASAAPAPSIPVASVAAAVNPPPST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560967;
- 90% Identity
- iTF_00511206; iTF_00501736; iTF_00497314; iTF_00498082; iTF_00558594; iTF_00576994; iTF_00521283; iTF_00616131; iTF_00593029; iTF_00518374; iTF_00552966; iTF_00595878; iTF_00564584; iTF_00535242; iTF_00552235; iTF_00498801; iTF_00543675; iTF_00527980; iTF_00582892; iTF_00597292; iTF_00513391; iTF_00496530; iTF_00482163; iTF_00606995; iTF_00495041; iTF_00609814; iTF_00566722; iTF_00570329; iTF_00485793; iTF_00619771; iTF_00560189; iTF_00573981; iTF_00598814; iTF_00500237; iTF_00557138; iTF_00576277; iTF_00522102; iTF_00525059;
- 80% Identity
- -