Spol023462.1
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- SMARCC2
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010002156.1:405008-409678[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 6.7e+03 -2.1 0.2 35 43 204 212 202 214 0.84 2 2 8.3e-15 1.5e-11 44.8 0.2 3 44 655 696 653 698 0.95
Sequence Information
- Coding Sequence
- ATGAACACACTCGGTCCCAAAAAGGACGGTAGTCCTAATATTGACTTTTTCCAATCGCCAGAGACTCTGCAAGGCTTTGAGTCGATAAGACTATGGCTACAGAAGAATTGTAAAAAGTACTTGGCGCACAGTTCGGAGCCCATCACAAAGGAGTCACTTGCACAGTTGCTTATACTTTTTCTGCAATATGTGGAGGCGAAATTGGGCAAAACTTCGGCTGAACCGCCGGCGACGAGAATCCCGATGCGCTGTTTTCTGGATTTTAAAAACGGTGGTGGTCTCTGCATTATTTTCTCCACGATGTTCCGCTTTCGTGCCGAGCAACGTGGCAAAAAGTTTGACTTTTCCATTGGCAAGAATCCAACACGGAAGGATCCCAACATTCAACTGCTGATCGAGATCGATCAGGCACTCGTAGAGGCAGATCTTTATCGCATTCCTTACATTTATATCAGGCCAGAGATTGAGAAGAGCTTTGAGGCGCGTCTGCGTGAAATTCTTGACAACCGACGAGTGGAGATCGTCACCGATGAGGAGGATGCCACGCACATCGTGTATCCTGTGGTGGATCCTCATCCCGATGAATACGCTCGACCTATTTTTAAGCGTAGCAACCATGTTATGCTTCACTGGTACTACTTTCCCGAGTCCTATGACTCGTGGACTCTGAATAGTTTCGATTTGCCCGACAATATACCAGAGAACCCGGAATCACCGGCAGAGCGTTGGCGAGTGTCTGCATCGTGGATAATTGACCTGGAGCAGTATAATGAGTGGATGGCTGAGGAGGACTACGAGGTGGATGAGCAGGGTAAAAAGAAGACGCACAAGCAGCGCATGTCCATCGATGATATAATGTCTTTTGGCGATGAAAAAAAGAAGCCCACCACCAGCAGTGGCACTGGCAAACAAAAGCGACGCCGCTCTCCATCACCTACAACGTCCACATCCGCATCGAAACCGGGCAAGCGAAAGCGTTCCCCCGCAGTCATTCATAAAAAGTCACgtaacgacgacgacgatgaggATCTCACCCGGGACCTGGATGATCCGCCAGCTGAGCCCAATATTCAGGAAGTGCACAAGGCAACGCATTCGGCACTACAATCGACAGCCAGTCCAGCTCCAGGTGGCAAATCTCGGGGTGACAACGACATGATGCCCATCAAAGGTGGCACCATGACCGATCTGGATGATGAAATGACAGGCGGCAGTGGAGCCCAAGCTTTGTCTACTGGCGACGGTGAAAATTCGCAAACCGGCAAGACCAGCGATAACAGTAATACCCAGGAGTTCTCATCATCGGCTAAAGAGGACATGGAGGACAATGTGACCGAGCAGACGCATCACATTATTGTACCCTCATATTCGGCCTGGTTTGACTACAACTCAATTCATGTCATAGAAAAACGCGCTATGCCCGAATTCTTTAACAGCAAGAACAAATCCAAAACGCCAGAGATTTACATGGCCTATCGCAATTTTATGATTGACACTTACAGGCTAAATCCTACAGAGTACTTGACCAGCACTGCCTGTCGTCGCAATTTAGCAGGTGATGTGTGCGCTATAATGCGTGTGCATGCCTTCCTGGAGCAATGGGGCTTAATCAATTATCAGATCGATGCCGATTTGCGTCCGACACCCATGGGCCCGCCGCCCACCTCTCACTTTCACATACTATCGGACACGCCATCTGGTTTGCAGGCAATCAATCCGCAGAAGACTCAGCAGCCGTCGGCGGCCAAAACACTGCTCGATCTCGACAAGAAGCCGGTGGGCAAGGAGGGTAGCGTGGAGTGCGATAAGAGCGCAGGCAGCCTGGGCATCAAGACCGAGACGCTCGAGAATGGCGCCGCTAGTGGCTTGGCCTCAGGCGTCAGTCAGTTTGGCCTAAAACTGGACCAGTATGCCAAGAAGCCCGCGGCTATGAGGAATCGTACGGCGGCAAGCATGTCGCGCGAGTGGACCGATCAGGAGACACTGCTGTTACTCGAAGGCCTCGAGATGCACAAGGATGACTGGAACAAGGTGTGCGAGCATGTAGGCACACGCACTCAAGACGAGTGTATATTGCACTTTTTGCGGCTACCCATCGAGGATCCGTATCTTGAGGATGATGGCGGCTTTCTGGGACCGCTTGGCTGCCAGCCTATTCCATTTAGCAAGTCTGGCAATCCGATTATGTCAACAGTCGCATTTCTGGCATCCGTTGTAGATCCTCGCGtcgcagcagctgctgctaaGGCCGCCATGGAAGAGTTTGCAGCTATTAAAGATGAGGTGCCAGCTACCATTATGGATAACCATATGAAGAACGTGGAAAAGGCTTCAACTGGCGGCAAATTCAATCCCAATTTCGGTTTGGCCAATAGTGGTATTGCGGGCACTGGCAATGACAAGGACGATGACGAATCAAAAGagggcaacaacagcatctcATCGGCAGTGGGCAATGATGAGGAAATGAAGGATCTAAGCAAGAAAGACGACGATGCCAACTACAAAGACAAAACGAAAACGGATAAGCTCAACACAGACACAGACTCAAGTtccacatcaacaacagctactactacaacaacaacagcaacaacaagccacACACCCACTACAAATAATACAGATCTAAAAAAATCTAAAGATTCGAGCGGCGACAAAGCCAACAAacccgacaacaacaaaacgaacaaCGCCTCAAACAAATCGGCTTCCAACTCCTCACCCACAGAGACCGGCACCAACAGCGATGTGGAGATCAAAACGGAGGAAAACAGTGGCGATGGCGAGACCACCAAGGATGGCAGCAACGATACCAGCAGCACTAGCGCTTCGGCCAAAGAAGGAGGTGCCTTCAGTGAGAACAATatgcaaacagcagcagctgctgctttggCCTCGGCCGCAGTCAAGGCCAAACATTTGGCGGCTTTGGAGGAACGCAAAATCAAGTCTCTGGTCGCACTGCTTGTGGAGACGCAAATGAAGAAGCTCGAAATAAAACTGCGGCATTTTGAGGAGCTAGAGGCTACTATGGAACGTGAGCGCGAGGGTCTCGAATACCAGCGACAGCAGCTCATCACAGAGCGCCAACAGTTCCATTTGGAGCAACTAAAGGCAGCCGAGTTTCGAGCACGCCAACAGGCGCATCACCGCCTGCAACAGGAGCTACAGCAGCAGGGTCAGGCGGGCGCTCCCGCTGTAGGTGGTATGATATTGCCACCGCAACCgggacagcagcaacagcagccgctaccaccgccaccgccccatcatcatcagcagcagcagcagccgttgcCACAACACGCGcatcagctgcagcagcagccgcaaccgCTGGCAGCTCCATCGGCGCAGCATCAACCTCTACCACCGCACATAGCTGCAGGTGCACCGGCAAATGGTGCACCATTTACAGCACCGCCAGTTGTGCCTCCCGTGGTCGCAGCGccgccagcaacagcagtcgAAATTCCAGCAACTGTGGCCCAAGCTCTGGCGCCAACGCCAATGGACACTACACAACCAGCAAATGCACCACCTGTTGCAGAAGTCGCCAGCATGCCAGCAGTTGCGCCCATCACAGCGCCTGCTTCAAGCATTCCGGCGGCAAgcgttgctgctgcaaatCCACCTCCCTCATCTTAA
- Protein Sequence
- MNTLGPKKDGSPNIDFFQSPETLQGFESIRLWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKTSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIDQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRSNHVMLHWYYFPESYDSWTLNSFDLPDNIPENPESPAERWRVSASWIIDLEQYNEWMAEEDYEVDEQGKKKTHKQRMSIDDIMSFGDEKKKPTTSSGTGKQKRRRSPSPTTSTSASKPGKRKRSPAVIHKKSRNDDDDEDLTRDLDDPPAEPNIQEVHKATHSALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSGAQALSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPVGKEGSVECDKSAGSLGIKTETLENGAASGLASGVSQFGLKLDQYAKKPAAMRNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASTGGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSISSAVGNDEEMKDLSKKDDDANYKDKTKTDKLNTDTDSSSTSTTATTTTTTATTSHTPTTNNTDLKKSKDSSGDKANKPDNNKTNNASNKSASNSSPTETGTNSDVEIKTEENSGDGETTKDGSNDTSSTSASAKEGGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQAGAPAVGGMILPPQPGQQQQQPLPPPPPHHHQQQQQPLPQHAHQLQQQPQPLAAPSAQHQPLPPHIAAGAPANGAPFTAPPVVPPVVAAPPATAVEIPATVAQALAPTPMDTTQPANAPPVAEVASMPAVAPITAPASSIPAASVAAANPPPSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560967;
- 90% Identity
- iTF_00598082;
- 80% Identity
- -