Dbif006414.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila bifasciata
Gene Symbol
SMARCC2
Assembly
GCA_009664405.1
Location
CM019044.1:44395524-44400028[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-14 1.2e-11 44.3 0.2 3 44 653 694 651 696 0.95

Sequence Information

Coding Sequence
ATGAACACACTGGGCCCCAAGAAGGACGGAAGTCCGAATATTGACTTCTTTCAGTCGTCGGAGACGCTGCAGGGCTTCGAATCAATTAGGCAATGGCTGCAAAAGAATTGTAAAAAGTACCTGGCGCACAGCTCGGAGCCCATTACCAAGGAGTCCCTGGCCCAATTGCTGATACAATTTCTGCAATATGTGGAGGCGAAACTTGGCAAAAACTCGGCCGAGCCGCCGGCAACCAGAATTCCGATGCGTTGCTTTCTGGACTTTAAGAACGGCGGAGGACTGTGCATCATTTTCTCCACGATGTTCCGGTTCCGCGCGGAGCAGCGTGGAAAGAAGTTTGACTTTTCGATTGGCAAGAATCCCACGAGGAAGGATCCCAACATCCAGCTGCTGATCGAGATCGAGCAGGCGCTGGTGGAGGCAGATCTATACCGCATACCCTACATCTATATAAGGCCGGAGGTGGAGAAGGGCTTCGAGGGACGGCTGCGCGAGATTCTTGACAATCGGCGGGTGGAGATCGTCACCGACGAGGAGGATGCCACGCACATTGTCTACCCCACTGTGGATCCGCATCCGGACGAGTATGCCCGTCCCATTTTCAAGCGTGGCAGCCATGTGATGCTGCATTGGTACTACTTTCCCGAGTCCTATGATTCGTGGACGGTCAACAGCTTCGACTTGCCGGAGAATATTCCCGAGAATCCGGAATCGCCGGCTGAGAGGTGGCGCGTCTCGGCCTCCTGGATACTCGACTTGGAGCAGTACAACGAATGGATGGCCGAGGAGGACTACGAGGTGGATGAGCAGGGCAAAAAGAAGACGCACAAGCAACGCATGTCCATCGACGACATCATGTCGTTTGGCGACGAAAAGAAGAAACCCAGCACCAGTACTGGCAAGCAGAAGCGCCGCCGTTCGCCCTCGCCCACAACATCCACATCGAAGCCCGGCAAGCGCAAGCGTTCGCCGGCCGTCATCCACAAGAAAACCCGAAACGATGAGGAAGATGAAGATCTGACGCGGGATCTGGACGATCCGCCAGCCGAGCCGAACGTTCAGGAGGTGCACAAGGCCAGTACGGCGCTGCAATCGACCTCCAGTCCGGCACCAGGTAGCAAGTCACGCGGCGACAACGATATGATGCCCATCAAGGGTGGAACGATGACGGATCTGGACGATGAGATGACTGGGGGCAGCGCTGCCCAGGCACTATCCACTGGCGACGGGGACAACTCGCAGACGGGCAAGACgagcgacaacagcaacacgcAGGAGTTCTCGTCGTCGGTCAAGGAGGATATGGAGGATAATGTGACCGAGCAGACGCATCACATCATTGTGCCCTCGTACTCGGCCTGGTTCGACTACAACTCCATCCATGTGATCGAGAAACGCGCCATGCCCGAGTTCttcaacagcaaaaacaaatccAAGACCCCAGAGATTTACATGGCCTATAGAAACTTTATGATAGATACCTACAGACTCAATCCCACGGAGTACTTGACGAGCACCGCCTGCAGGCGCAATCTGGCGGGAGATGTGTGCGCCATTATGCGTGTGCATGCCTTTCTGGAGCAGTGGGGATTGATCAACTACCAGATCGATGCCGATCTGCGGCCCACGCCCATGGGACCGCCGCCTACCTCGCACTTCCACATACTGTCTGACACGCCATCGGGCCTGCAGGCCATTAATCCGCAGAAAACTCAACAGCCATCGGCCGCCAAGACACTGCTGGATCTCGACAAGAAGCCGCTGGGCAAGGATGGCAGCTTGGAGAGCCTGGGCGGCGATAAGAGCGGCACCCTTGGCGCCATCAAGACGGAGGCATTGGAGAATGGAGCCGCCAGTGGCCTGAGCTCTGGCGTGAGCCAATTCGGCCTGAAGTTGGATCAGTATGCCAAGAAGCCGTCTGCCATGAGGAATCGCACGGCGGCCAGCATGGCCAGGGAGTGGACCGACCAGGAGACGCTGCTCCTGCTGGAGGGCCTGGAGATGCACAAGGATGACTGGAATAAGGTGTGCGAGCATGTGGGCTCTCGCACGCAGGACGagtgcattttgcatttcctGCGGCTGCCCATCGAGGATCCCTATCTGGAGGATGATGGCGGCTTCCTGGGGCCCCTGGGCTGTCAGCCCATACCGTTCAGCAAGAGCGGCAATCCCATTATGTCCACAGTGGCATTTTTGGCCTCTGTGGTGGATCCCCGTGTGGCCGCCGCAGCCGCCAAGGCAGCCATGGAGGAGTTTGCAGCCATTAAGGACGAGGTGCCAGCCACCATTATGGACATCCATATAAAGAGCGTGAAGAAGGCCTCCGCTGGCGGCAAATTCAATCCGAACTTTGGTCTATCCAACAGCGGCATTGCGGGCACCGGCAACGACAAGGAGGATGAGGAGAGCAAggatggcagcagcggcagtagcTCGGCCACAGCGGCCGGTGgcgcagcaggaggaggtgcaGCAAGTGATGAGGAAATGAAGGATCTAACCAAGAAAGACGACGATGCCAAGTCCAAAGACAAAACGAAATCGGATACCAAGacgaacacaaacacagactcTAGttccacatcatcatcatcatcatcatcaacgacagcgacagccacaagcaacacacagaacacaactACAGATAATAAGAAACCGAAAGATTCCTCGGATAAGGCCAGCAAAACAGACAAATCAAACAAATCCTCACCCAcagacccagcagcagcagcatcagcggcaggaggagcagtagtacccagtggcagtggcgtaGGCGGATCAACAGTCGATGTGGACATCAAAACGGAGGAGAACAGTGGCGATGGGGAGACCAAGGATGGCAGCGATGGCTCCAAGGATAGCTCGAGTGGCCAAGGCAGCAACAAGGAGGGGGGGGCCTTCAGTGAGAACAATATGCAGAcggcggcagcagccgcaCTGGCCTCGGCGGCGGTCAAGGCCAAGCATTTGGCTGCACTCGAGGAGCGCAAGATCAAGTCTTTGGTGGCCCTGCTCGTTGAGACGCAAATGAAGAAGCTGGAGATCAAGCTGAGGCACTTTGAGGAGCTCGAAGCTACCATGGAGAGGGAGCGTGAGGGCCTGGAGTACCAGCGACAGCAGCTGATTACAGAGCGCCAGCAGTTCCATTTGGAGCAGCTGAAGGCGGCCGAGTTCCGTGCCCGCCAGCAGGCGCATCATCGTTTGCAGCAGGAGATGCAAGGCCAGGCAGCCGCTGCCGGCACTATGatcctgcaacagcagcagcagcagcaacaacagccaacGCCGCCACCACAGCagccccaacagcaacagccactgccacagcatcTGCatccgcagcaacagcagcagcagccactgccacCCCATCAGGCGCAGGTGCAGACACAACCGCTGGCAGCTCCATCGGCACAGCATCAGCCACTGCCGCCGCACATAGCAGCGGTGGGCGTGGTGCCGCCACCAAATGGTGCGCCATTCGCAGCGCCGCCCATGGCGACAGCGGCAGCTGGTGGTGGAGCACCTCCCACAGGAGGTGGCATACCAGCGGTTTTGGCAACAGCCAGCGAacaggcaggagcagcagcagctgcagctgcagcagccgcagcggcggcggcgcaaCCTCAGGCACCCACACCGATGGATACCACACCGCCGACAATCAGCGCACCTGTGGCGGAGGTCCCAAGCGCAccggtggtggtgctgccacCTGCCGCCGTCTCAAGCATTCCTCCGGCCAGCGCTGTGGCTCCAGTGGCAGCACCAGCCGTTGCTCCACCATCTTAA
Protein Sequence
MNTLGPKKDGSPNIDFFQSSETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIQFLQYVEAKLGKNSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEVEKGFEGRLREILDNRRVEIVTDEEDATHIVYPTVDPHPDEYARPIFKRGSHVMLHWYYFPESYDSWTVNSFDLPENIPENPESPAERWRVSASWILDLEQYNEWMAEEDYEVDEQGKKKTHKQRMSIDDIMSFGDEKKKPSTSTGKQKRRRSPSPTTSTSKPGKRKRSPAVIHKKTRNDEEDEDLTRDLDDPPAEPNVQEVHKASTALQSTSSPAPGSKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGDNSQTGKTSDNSNTQEFSSSVKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKDGSLESLGGDKSGTLGAIKTEALENGAASGLSSGVSQFGLKLDQYAKKPSAMRNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDIHIKSVKKASAGGKFNPNFGLSNSGIAGTGNDKEDEESKDGSSGSSSATAAGGAAGGGAASDEEMKDLTKKDDDAKSKDKTKSDTKTNTNTDSSSTSSSSSSSTTATATSNTQNTTTDNKKPKDSSDKASKTDKSNKSSPTDPAAAASAAGGAVVPSGSGVGGSTVDVDIKTEENSGDGETKDGSDGSKDSSSGQGSNKEGGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEMQGQAAAAGTMILQQQQQQQQQPTPPPQQPQQQQPLPQHLHPQQQQQQPLPPHQAQVQTQPLAAPSAQHQPLPPHIAAVGVVPPPNGAPFAAPPMATAAAGGGAPPTGGGIPAVLATASEQAGAAAAAAAAAAAAAAQPQAPTPMDTTPPTISAPVAEVPSAPVVVLPPAAVSSIPPASAVAPVAAPAVAPPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00560967;
90% Identity
iTF_00514820; iTF_00474437; iTF_00580646; iTF_00574742; iTF_00517642; iTF_00603277; iTF_00473712; iTF_00484375; iTF_00480794; iTF_00611283; iTF_00600985; iTF_00471546; iTF_00563834;
80% Identity
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