Dfor004826.1
Basic Information
- Insect
- Drosophila formosana
- Gene Symbol
- SMARCC2
- Assembly
- GCA_035045625.1
- Location
- JAWNOW010000272.1:359373-364381[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3 3e+03 -1.6 0.1 34 43 203 212 202 214 0.84 2 2 1.1e-14 1e-11 44.7 0.2 3 44 667 708 665 710 0.95
Sequence Information
- Coding Sequence
- ATGAACACATTAGGTCCTAAGAAGGACGGAAGTCCCAATATTGACTTTTTCCAATCGCCAGAGACACTGCAAGGTTTCGAGTCGATTCGCCAATGGCTACAAAAGAATTGTAAAAAGTACTTGGCGCACAGTTCGGAGCCGATTACAAAAGAATCGCTGGCTCAATTGTTGATACTATTTCTGCAATATGTGGAGGCGAAACTGGGCAAAAACTCTGCCGAACCGCCGGCGACGAGAATTCCGATGCGCTGCTTTCTCGACTTTAAACAGGGCGGTGGCCTGTGCATAATTTTCTCTACTATGTTCCGCTTCCGCGCCGAACAACGTGGCAAAAAATTCGACTTCTCCATTGGCAAGAATCCCACACGCAAGGATCCCAACATCCAGCTGCTGATCGAGATCGAACAGGCGCTGGTCGAGGCCGATCTCTATCGCATACCCTACATCTACATTCGTCCCGAGATCGAGAAGTCGTTCGAGTCGCGTCTGCGCGAAATTCTTGACAATCGCCGCGTGGAGATCGTCACTGATGAGGAGGATGCCACCCACATTGTGTATCCCGTCGTGGATCCCCATCCGGATGAATATGCTCGGCCGATCTTCAAGCGTGCCAATCACGTTATGCTGCATTGGTATTATTTCCCCGAGTCGTACGATTCGTGGACTCTGAACAGCTTCGATCTGCCGGAGAATATACCGGAGAATCCGGAATCGCCAGCGGAACGTTGGCGGGTGGCCGCCACCTGGATTTTGGACCTGGAGCAGTACAACGAGTGGATGGCCGAGGAGGATTACGAAGTGGATGAGATGGGCAAAAAGAAGACACATAAGCAGCGCATGTCCATCGACGACATCATGTCTTTTGGCGACGACAAAAAAAAGCCCACGGTAAGCAGTGGAACTAGCAAACAGAAGCGTCGTCGCTCCCCCTCGCCCACCACCTCCTcgtccacatccacatcgaaGCCGGGCAAGCGGAAGCGTTCGCCCGCCGTCATCCACAAGAAGTCacgcaacgacgacgacgacgaggatcTGACGCGGGATCTGGACGACCCACCAGCCGAGCCCAACATCCAGGAGGTGCACAAGGCAACGCACTCCGCACTGCAGTCAACTGCCAGCCCCGCCCCAGGTGGCAAATCGCGAGCCGACAACGATATGATGCCCATAAAGGGTGGCACCATGACCGACTTGGATGACGAGATGACGGGCGGCAGCGCTGCCCAGGCAATGTCCACGGGCGACGGCGACAACTCACAGACGGGCAAAAcgagcgacaacagcaacacgcaGGAGTTCTCGTCGTCGGCCAAGGAGGACATGGAGGACAACGTAACGGAGCAGACGCACCACATCATTGTACCCTCGTACTCGGCCTGGTTCGACTACAACTCCATCCACGTAATCGAGAAGCGCGCCATGCCTGAGTTCTtcaacagcaagaacaagtCGAAGACGCCCGAGATCTACATGGCATATCGCAACTTTATGATCGACACCTACAGGTTGAATCCCACTGAGTACTTGACCAGCACCGCGTGTCGTCGAAACTTAGCAGGCGATGTGTGCGCCATAATGCGTGTTCACGCCTTCCTGGAGCAGTGGGGCCTGATTAACTATCAGATCGATGCTGATTTGCGGCCCACGCCCATGGGACCGCCGCCCACTTCGCACTTTCACATACTGTCGGACACGCCGTCGGGTTTGCAGGCCATCAATCCGCAGAAGACTCAACAGCCGTCGGCCGCCAAGACGCTGCTTGATCTCGACAAGAAGCCGCCGCTGGGCAAGGATGGCGTTGAGTGCGACAaggcagcggctgctgctgctgccgctgctgctggcggacTGAGCAGCATTAAGACGGAAGCACTTGAAAACGGTGCAGCAGGCGGCGGCTTGTCCTCTGGCGTAAGTCAGTTTGGCTTGAAGCTAGATCAATATGCAAAGAAGCCGGCGGCCATGAAGAATCGTACGGCGGCAAGCATGGCACGCGAGTGGACCGATCAGGAgacactgctgctgctcgagggTCTCGAGATGCATAAGGATGATTGGAACAAGGTGTGCGAACATGTCGGCACTCGCACTCAGGACGAGTGCATTCTGCACTTCCTGCGTTTGCCCATCGAGGATCCGTATCTGGAGGAAGATGGTGGTTTCCTGGGTCCACTCGGCTGCCAGCCAATTCCGTTTAGCAAATCTGGCAATCCCATTATGTCGACTGTGGCGTTCTTAGCGTCTGTTGTCGATCCACGAGTCGCGGCCGCTGCTGCCAAGGCCGCCATGGAGGAATTTGCCGCCATCAAGgACGAGGTGCCAGCCACCATTATGGACAACCACATGAAGAACGTCGAAAAGGCTTCGTCGGGCGGCAAGTTCAACCCGAACTTTGGTCTGGCCAACAGCGGCATTGCGGGCACTGGCAACGAcaaggacgacgacgagtcCAAGgagggcaacaacagcagcagttctGCTTCCGCCGCCAACGACGAGGAGATGAAGGATCTAAGCAAGAAAGACGAAGAGGCAAAGTCGAAAGACAAAACGAAATCGGATAAGctcaacacaaacacagactCAAGTtccacatcaacaacaacatcaacatcatcaacgacaacaacaacatcagcaccaacaacaacatcaacaacgcCCATTACCAATAACACTGATAAAAAATCTAAAGAaacatcatcgtcgtcgtcgttggccggcgacaacgacaaagccaacaaaactgaaaaatcgAGCAACGCCTCAAACAAAACGGCTTCCAACTCCTCACCCACAGAGACTGGAACTGGCACTGGAGATGTGGAGATCAAAAGTGAGGACACCAGTGGCGATGGCGAGACCAAGGATGGCAGCAGTGATGCCAGCAGCGGTGGCGCAGTCTGCGCCACCAACAACAAGGAAGGCGCCTTCAGCGAGAACAACATGCAGacggcggcagcagccgcaCTCGCTTCGGCAGCCGTCAAGGCGAAACATTTGGCCGCGCTGGAAGAGCGCAAGATCAAATCCCTGGTGGCGCTGTTGGTGGAGACACAGATGAAGAAGTTGGAGATAAAGTTGCGGCATTTTGAGGAACTGGAGGCGACCATGGAACGCGAGCGTGAAGGTCTCGAGTATCAGCGACAACAGCTCATTACGGAGCGACAGCAATTCCACCTAGAGCAGTTGAAGGCAGCCGAGTTTCGGGCACGCCAGCAGGCGCATCATCGACTGCAACAGGAGTTGCAGCAACAGGGTCAAGCGGCCGCTGCCGCCGGCTCCATATTGATGCAaccccagcaacaacagcagctgcagcaaactttgccgccgccagcgccgcatcatcatcagcaaccACCACCATCAGCTGTGGTGTCAGCGCATCCGCATCAGCCACAACCGCAACCGCAGCAGCTGGCAGTACCATCagcgcagctgcaacagcagcagccgttgcCACCGCATATAACAGCTGGTCCACCGCCCAATGGTGCCGCATTCGCTGCGCCGCCAATTGTTCCCGCTGTGGCTGCAGCGCCGACAACCACAGTGGCAACAGCAGAGCAAACAGTGGCAACTGTGGTGGCACCGCCAGCTCAGGCAACGCCGACGCCAATGGACACTACACCGCCAGCTAATGCACCGCCAGTGGTGGCACCcgaagctgccgctgccgccagcgtgacagcagcagttgctgcaagTGCAGCGCCTGCTCCTAGCATTCCAGCGGccactgttgctgcagctgctgcaccgGCACCTCCTCCTTCATCTTAA
- Protein Sequence
- MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKNSAEPPATRIPMRCFLDFKQGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFESRLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRANHVMLHWYYFPESYDSWTLNSFDLPENIPENPESPAERWRVAATWILDLEQYNEWMAEEDYEVDEMGKKKTHKQRMSIDDIMSFGDDKKKPTVSSGTSKQKRRRSPSPTTSSSTSTSKPGKRKRSPAVIHKKSRNDDDDEDLTRDLDDPPAEPNIQEVHKATHSALQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPPLGKDGVECDKAAAAAAAAAAGGLSSIKTEALENGAAGGGLSSGVSQFGLKLDQYAKKPAAMKNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEEDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASSGGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSSSSASAANDEEMKDLSKKDEEAKSKDKTKSDKLNTNTDSSSTSTTTSTSSTTTTTSAPTTTSTTPITNNTDKKSKETSSSSSLAGDNDKANKTEKSSNASNKTASNSSPTETGTGTGDVEIKSEDTSGDGETKDGSSDASSGGAVCATNNKEGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQAAAAAGSILMQPQQQQQLQQTLPPPAPHHHQQPPPSAVVSAHPHQPQPQPQQLAVPSAQLQQQQPLPPHITAGPPPNGAAFAAPPIVPAVAAAPTTTVATAEQTVATVVAPPAQATPTPMDTTPPANAPPVVAPEAAAAASVTAAVAASAAPAPSIPAATVAAAAAPAPPPSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560967;
- 90% Identity
- iTF_00553670;
- 80% Identity
- -