Sjav011721.1
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- SMARCC2
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010005545.1:3432-8289[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 1.3e+04 -1.0 0.1 34 43 203 212 202 214 0.85 2 2 9.6e-15 6.4e-11 44.8 0.2 3 44 654 695 652 697 0.95
Sequence Information
- Coding Sequence
- ATGAACACACTAGGTCCTAAAAAGGACGGAAGTCCTAATATTGACTTTTTCCAATCGCCAGAGACGCTCCAGGGCTTCGAGTCAATACGACAATGGCTACAAAAGAATTGTAAAAAGtacTTGGCGCACAGCTCGGAGCCGATAACGAAGGAGTCACTGGCACAATTGctcatattatttttgcagtaTGTCGAGGCCAAATTGGGAAAGAATTCGGTTGAGCCGCCGGCTACTAGAATCCCGATGCGCTGCTTTTTGGATTTCAAAAACGGAGGAGGTCTCTGCATCATTTTTTCAACCATGTTCCGTTTCCGTGCTGAGCAACGTGGTAAAAAGTTTGACTTTTCGATTGGAAAGAATCCCACGCGAAAAGATCCTAATATTCAGCTACTAATTGAGATAGAACAAGCTCTTGTTGAGGCTGATCTTTACCGTATACCCTACATTTATATCAGACCCGAGATTGAGAAGAGCTTTGAGGCACGACTAAGAGAAATCCTTGACAATCGTCGGGTGGAGATCGTTACAGACGAGGAGGATGCCACGCATATTGTCTATCCGGTGGTTGATCCACATCCTGATGAATATGCACGACCTATTTTTAAGCGTGGAAACCATGTAATGCTTCACTGGTACTATTTTCCAGAGTCCTATGATTCATGGACGCCAAATAGCTTCGAATTGCCGGAAAATATACCGGAAAATCCAGAGTCTCCGGCAGAACGTTGGCGTGTTGCTGCATCCTGGATTTTGGACCTTGAGCAGTATAATGAATGGATGGCCGAGGAGGATTATGAAGTAGATGAGATGGGCAAGAAAAAAACGCACAAGCAGCGCATGTCGATTGACGACATAATGGCCTTTGGCGATGACAAAAAGAAACCTACCACAAGCAGTGGTACTGGCAAACAGAAACGACGCCGCTCTCCATCACCCACTACTTCAACATCCACTTCGAAACCGGGCAAGCGAAAGCGATCTCCAGCtgttatacataaaaaatctcgcaatgatgatgacgagGAAGATCTTACCCGTGATCTTGACGATCCACCAGCTGAGCCCAATATTCAGGAGGTTCATAAGGCTCAATCAACACTACAATCGACAGCTAGTCCTGCACCAGGGGGTAAATCAAGAGCTGATAATGATATGATGCCTATTAAAGGTGGCACCATGACCGATCTGGATGATGAAATGACCGGAGGCAGTGCTGCTCAAGCACTCTCCACTGGGGATGGAGACAATTCACAAACGGGCAAGACCAGCGATAACAGCAATACACAGGAGTTCTCGTCTTCTGTTAAAGAGGATATGGAAGACAATGTCACCGAACAGACACATCACATTATTGTGCCCTCGTATTCCGCTTGGTTTGATTATAACTCAATTCATGTCATTGAAAAACGCGCTATGCCTGAGTTTTTCAACAGTAAGAACAAATCAAAGACGCCAGAAATATACATGGCCTATCGGAACTTTATGATTGATACCTACAGGTTGAATCCAACAGAATACTTGACTAGCACAGCTTGTCGTCGAAATTTGGCTGGCGACGTGTGCGCTATAATGCGGGTGCATGCGTTTTTGGAACAGTGGGGTTTGATCAATTACCAGATTGATGCGGATTTGCGACCAACACCTATGGGTCCGCCGCCAACCTCGCATTTTCACATACTCTCAGACACGCCATCTGGCCTGCAATCGATCAATCCGCAAAAGACACAGCAACCATCAGCTGCCAAAACTTTGCTCGATCTCGACAAGAAGCCCCTTGGCAAGGAATCTAGTGGTGAGTGTGATAAAGGTACAGCTGGATTGGGCATAAAGACAGAGACTCTCGAGAATGGGGCTGCTACTGGATTGTCTTCTGGCGTCAGTCAATTTGGTCTCAAGCTGGATCAGTATGTTAAAAAGCCAGCGGCTATGAAGAACCGTACGGCGGCAAGCATGTCGCGTGAGTGGACTGACCAGGAGACGTTACTGCTGCTCGAGGGACTTGAAATGCACAAAGATGATTGGAATAAGGTGTGCGAACATGTGGGCACACGCACGCAAGACGAATGCATTCTGCACTTTCTACGTCTGCCCATTGAAGATCCATACCTTGAGGATGACGGCGGCTTTCTAGGTCCACTTAGTTGCCAGCCAATACCATTTAGCAAATCTGGCAATCCCATCATGTCAACTGTGGCATTTTTGGCATCTGTCGTAGATCCACgagttgctgcagctgccgccaAAGCTGCCATGGAAGAATTTGCTGCTATCAAGGATGAGGTACCAGCCACTATCATGGATAACCATATGAAGAACGTGGAGAAAGCTTCAGCAGGAGGTAAATTCAATCCCAACTTCGGCTTGGCCAATAGTGGCATTGCCGGCACCGGCAATGACAAAGAAGACGAAGATGGCAAGGAAGCTAATAACATCAgcaatgcagcaacagctaatGACGAGGAGTCCAAGGATCTTAACAAGAAAGACgACGACAACAAGTCAAAAGACAAAACGAAATCGGATAAGctcaacacaaacacagactcAAGTTCCACAAcctcaacatcatcaacaacagcaacaacactatcatcaacaacaacaacaacaacaacatcgcccataacaaataacacagataaaaaacttaaagagCCATCCGACAGAGCCAACAAAACTGATAAAACGACCAACGCTTCAAACAAAACAGCTTCCAACTCCTCACCCACAGAGCCTGGCACTGCTAGCGATGTCGAGATCAAAACAGAGGACAACAGTGGCGATGGCGAGACTAAGGATGGTAGCACTGACATCAACAGTGCTACTGCTTCGGTTGCTAAGGACAGCACATTTACTGAGAACAATATGCAAActgccgctgcggctgcgTTGGCGTCTGCGGCTGTTAAGGCGAAACACCTGGCTGCACTGGAGGAGAGGAAAATTAAGTCGCTTGTTGCATTGCTGGTTGAGACGCAAATGAAGAAGCTGGAAATTAAGCTGCGCCATTTCGAAGAGCTTGAAGCGACAATGGAGCGCGAACGTGAAGGCCTTGAATATCAACGCCAGCAACTAATTACAGAGCGACAGCAGTTCCATTTAGAGCAACTGAAGGCAGCCGAATTTCGGGCCAGGCAGCAAGCCCATCATCGTTTGCAGCAGGAGTTACAACAACAGGGacaagctgccgctgcttcagGCTCAATGATTTTGCCACcccatcagcaacagcagcaacaacatccgcagcagcaacagtcgcaacCGCtggcaccaccgccaccacaacaacaaacagcacagccacagcagcagccgccacaGAGCCAGCCATCACAAGCGCAACCGCCGCATttgcaccagcagcatcaacaacagcagctgccagGGCCAGCAGCACAACATCAGCCGTTGCAGCCGCACATAGCGGTGGGTGCACCCCCTAACGGAGCACCCTTTGCGGCGCCAACAGCCACTCCACCAGTGGTTCCAACTCTGCCCTCTGTAGAGCAACCTGCTCCAGTGGCTCCATCTCATACGCCCACGCCAATGGATACTACACCGGCACCCAATGCAACACCTGTTGTTGAAGTCAATAGCACGGCTGCAACGGCATCAAACGCTGCGCCTGTTCCAAGCATTCCAGCAAACACTGTAGTCGCTGTATCTGctacagctgttgctgcaccTCCTGCTCCTGCAACTTCATCTTAA
- Protein Sequence
- MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKNSVEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTPNSFELPENIPENPESPAERWRVAASWILDLEQYNEWMAEEDYEVDEMGKKKTHKQRMSIDDIMAFGDDKKKPTTSSGTGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDDDEEDLTRDLDDPPAEPNIQEVHKAQSTLQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGDNSQTGKTSDNSNTQEFSSSVKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQSINPQKTQQPSAAKTLLDLDKKPLGKESSGECDKGTAGLGIKTETLENGAATGLSSGVSQFGLKLDQYVKKPAAMKNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLSCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPNFGLANSGIAGTGNDKEDEDGKEANNISNAATANDEESKDLNKKDDDNKSKDKTKSDKLNTNTDSSSTTSTSSTTATTLSSTTTTTTTSPITNNTDKKLKEPSDRANKTDKTTNASNKTASNSSPTEPGTASDVEIKTEDNSGDGETKDGSTDINSATASVAKDSTFTENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQAAAASGSMILPPHQQQQQQHPQQQQSQPLAPPPPQQQTAQPQQQPPQSQPSQAQPPHLHQQHQQQQLPGPAAQHQPLQPHIAVGAPPNGAPFAAPTATPPVVPTLPSVEQPAPVAPSHTPTPMDTTPAPNATPVVEVNSTAATASNAAPVPSIPANTVVAVSATAVAAPPAPATSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560967;
- 90% Identity
- -
- 80% Identity
- -