Dmon008348.1
Basic Information
- Insect
- Drosophila montana
- Gene Symbol
- SMARCC2
- Assembly
- GCA_003086615.1
- Location
- LUVX01059714.1:136977-143285[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8 1.9e+03 -0.9 0.1 34 43 126 135 125 137 0.85 2 2 8.6e-15 9.4e-12 44.9 0.2 3 44 581 622 579 624 0.95
Sequence Information
- Coding Sequence
- atgTACGAAAAAATGCGCTGTTTTCTGGATTTTAAAAACGGTGGAGGTCTCTGCATAATTTTCTCCACCATGTTTCGTTTTCGAGCTGAGCAACGTGGCAAAAAATTTGACTTTTCAATTGGCAAGAATCCTACCCGCAAGGATCCCAACATTCAATTGCTGATCGAGATCGAACAGGCCCTTGTAGAGGCAGATCTCTATCGCATACCTTACATCTATATAAGACCAGAGATTGAGAAGGGCTTTGAGGCACGTCTGCGTGAGATTCTTGACAATCGGCGGGTTGAAATCGTCACTGATGAGGAGGATGCCACGCATATTGTCTATCCTGTGGTGGATCCACATCCTGATGAATATGCTCGCCCAATTTTCAAGCGTGGCAATCATGTCATGCTTCACTGGTACTACTTTCCTGAGTCATATGACTCTTGGACGCTGAATAGCTTTGATTTGCCGGAGAATATACCCGAGAACCCAGAATCGCCTGCAGAACGTTGGCGGGTGGCTGCATCATGGATTTTAGACCTAGAGCAGTACAACGAGTGGATGGCCGAGGAAGATTACGAGGTGGATGAGGTGGGCAAGAAAAAGACGCACAAACAGCGCATGTCCATCGATGACATTATGTCCTTTGGCGATGACAAAAAGAAGCCCACcacgagcagcggcagcggcaaacaAAAACGACGTCGGTCGCCGTCACCCACAACCTCAACGTCTACATCGAAGCCGGGAAAGCGAAAGCGGTCCCCAGCGGTCATACACAAGAAATCgcgcaacgacgacgacgatgaggaTCTTACACGGGATCTCGACGATCCGCCGGCTGAACCTAACATCCAGGAAGTGCATAAGGCGACGCATTCGGCGCTGCAATCGACAGCTAGCCCAGCACCCGGTGGCAAATCACGAGGTGATAACGATATGATGCCTATTAAGGGTGGCACCATGACTGATCTGGACGATGAAATGACTGGCGGCAGTGCTGCCCAGGCGCTGTCCACCGGCGACGGCGACAATTCACAAACGGGCAAGaccagcgacaacagcaacacccaGGAATTTTCATCCTCGGCCAAGGAAGATATGGAGGACAATGTGACCGAGCAGACGCATCACATCATTGTGCCCTCATATTCGGCCTGGTTCGACTACAACTCAATTCATGTCATCGAAAAGCGCGCCATGCCCGAGTTCttcaacagcaagaacaaatCCAAGACACCAGAAATTTATATGGCCTATCGCAACTTTATGATAGACACCTACAGGCTTAATCCCACAGAATACTTGACCAGCACAGCGTGTCGCCGTAATTTGGCTGGGGATGTGTGCGCCATAATGCGCGTGCACGCGTTCCTGGAACAATGGGGTCTCATCAACTATCAGATTGACGCCGATTTGCGTCCTACTCCTATGGGGCCGCCACCCACCTCACACTTTCACATACTCTCGGATACGCCATCTGGTTTGCAGGCAATCAATCCACAAAAGACGCAACAACCGTCGGCGGCCAAGACACTGCTCGATCTTGATAAGAAACCGTTGGGTAAGGAAACTGGCGTCGATTGCGATAagagcggcggcggcggcggcggcttagGCGTCAAGACTGAGACACTGGAGAATGGCGCCCCTAGTGGTTTAGCCTCTGGGGTTAGCCAGTTTGGCCTGAAGTTAGATCAATATGCCAAGAAACCGGCGGCCATGAAAAATCGTACTGCGGCGAGCATGTCGCGCGAGTGGACCGACCAGGagacgttgctgctgctcgagggCCTTGAGATGCATAAGGACGACTGGAATAAGGTGTGCGAACACGTGGGTACCCGCACCCAAGATGAATgcattttgcactttttgcgCCTGCCCATCGAGGATCCGTACCTTGAAGATGATGGCGGCTTCTTAGGCCCGCTTGGCTGTCAGCCAATTCCATTTAGCAAGTCTGGCAATCCAATTATGTCGACAGTTGCATTTCTAGCATCCGTGGTGGATCcgcgtgttgctgctgccgccgcaaaAGCTGCCATGGAGGAATTCGCCGCCATCAAGGACGAGGTGCCAGCTACTATTATGGACAACCATATGAAGAACGTGGAGAAGGCCTCAGCTGGTGGCAAATTCAATCCCAACTTTGGTCTAGCAAACAGCGGCATTGCTGGCACAGGCAATGACAAAGACGACGACGAATCAAAGGAGGGCAACAATAGTAGCTCCACAGCAGGCGGTAACGATGAGGAAATTAAGgatattaacaaaaaagacGCTACAGACGAAGCCAAGTCCAAAGACAAAACGAAATCGGATAAGctcaacacaaacacagactCAAGTtccacatcaacaacaacaactactacaacagcaacaagcaacacGCCCACCACCAATAACACAGATAAAAAATCTAAAGATTCGTCGTCGTCGGTGGCCGGCGGCGACAAAGCCAATAAAAACGACAAAACGAGCAACGCCTCAAACAAAACGGCTTCCAACTCCTCACCCACAGAAACTAGCACCAACAGCGATGTTGAGATCAAAACTGAGGACAACAGTGGGGACGGCGAGACCAAGGATGGCAGCAACGATGCCAGCAGCGTTGGAGCTACAGCCAAGGACGGGGCCTTCAGCGAGAACAAtatgcaaacagcagcagccgcagcattgGCCTCGGCAGCCGTCAAGGCGAAGCATTTGGCAGCGCTGGAGGAGCGCAAGATTAAGTCGCTGGTAGCATTACTGGTGGAGACACAAATGAAGAAGCTAGAAATTAAACTACGGCATTTTGAGGAGCTAGAGGCAACCATGGAGCGTGAACGCGAGGGTCTTGAATACCAGCGACAGCAACTTATCACGGAGCGCCAGCAATTCCATCTGGAGCAGCTGAAAGCGGCTGAATTTCGAGCGCGCCAGCAGGCGCATCATCGCCTACAACAGGAGCTACAGCAACAGGGACAGCAAGTGGGCGCTGCTGCGGGTGCCATGATCATGccgccacaacaacaacagcagcagacatTACCGCCGCCGcatcatcaccagcagcaacagtcgcagcagccgcaaccgGTGGGAGCGCCTTCGGCGCAGCATCAACCGTTGCCGGCGCACATAGCTGCAGGTGCACCGGCCAATGGTGCACCTTTTCCAGCGCCGCCAGTTGTCCCTCCTGCAGCCGCTGCGCCGCCAACACCGCCCGGCGAGCTGCCTGCACCTGTTGCGCAAGCTCAAGCGCCCACGCCAATGGAAACTACACCGCCAGCTAATGCAGCACCTGTTGCCGAGGTCGCCAGCGTGGCAGCAGTTGCGCCCAGTACTGCGCCTGCTCCAAGCATTCCAGCGGCAAGCGTTCCTGCTGTtaatcctcctcctcctgctccttcATCTTAA
- Protein Sequence
- MYEKMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKGFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPENIPENPESPAERWRVAASWILDLEQYNEWMAEEDYEVDEVGKKKTHKQRMSIDDIMSFGDDKKKPTTSSGSGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDDDDEDLTRDLDDPPAEPNIQEVHKATHSALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKETGVDCDKSGGGGGGLGVKTETLENGAPSGLASGVSQFGLKLDQYAKKPAAMKNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSSSTAGGNDEEIKDINKKDATDEAKSKDKTKSDKLNTNTDSSSTSTTTTTTTATSNTPTTNNTDKKSKDSSSSVAGGDKANKNDKTSNASNKTASNSSPTETSTNSDVEIKTEDNSGDGETKDGSNDASSVGATAKDGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQQVGAAAGAMIMPPQQQQQQTLPPPHHHQQQQSQQPQPVGAPSAQHQPLPAHIAAGAPANGAPFPAPPVVPPAAAAPPTPPGELPAPVAQAQAPTPMETTPPANAAPVAEVASVAAVAPSTAPAPSIPAASVPAVNPPPPAPSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560967;
- 90% Identity
- iTF_00598082;
- 80% Identity
- -