Hves006251.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- HLhylVes1:6809251-6843801[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.074 1.8e+03 -1.6 0.1 256 284 71 98 46 101 0.66 2 3 6e-78 1.4e-73 248.2 21.5 1 297 112 393 112 395 0.88 3 3 1 2.4e+04 -8.7 16.9 1 44 392 435 392 469 0.65
Sequence Information
- Coding Sequence
- ATGGGCCAGCGATCGGAAGTGGCCACGCCTGATAACAGCGACGAGGAGAGCGGGGACGCCTTCACCGATGGAGACTTCGGAGACTCCGATGAGGACGTCGTCGAACGTAATGACACTAACTCCCACATACCGGTCAATGAGACTGTTAATCAAGCAGTAACAACAGTTAATGGCAATGCCGCTCTTGATGATCCGAGTCCAGATAAATCTAAAATTAATGGACGGAGAATAAGTGAGAACCATACAGAGGATGAGGGTATTACAGACGTGAGAAGGGATTCACACGAACAAATACCTTCCATCGTTGGGATACTTGGAAACCAGCAGAATCACGCGGAACAGCGTCTGGCGGCGCGTAGAGCGGCGCGTGCTGAGGCGCGCGAGATACGCATGCGCGAACTGGAGAGGCAGCAGCGCGAACAAGAGGACCATGCAGACAAGGCCTACGACATGTATGCAGAGACGGTGGGTCGTCGCGCCGGCGGGCGACTGGCAGCGCTCAGCCCCGGCGGCGTGCACTCCCCGCGCCGCAGCTCCGAGGACTCCGTCGACGACAGCTTCAATGTCAAGGATCTTAGGCACGAGCTGAAGGAGGTTGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCATGAGGAGTATGCGCAGCTGCAGCGCGAGTACCGCGAGAAGTGCTCAGCTCACGAGCGTCTGAAgcgcgagcacgtgtcgctggagcgcgaggtgtgcgcggcgcggggcgcggtgcgggcgcgcgacgcggcggcgcACGCGGCCGGCTTCGCGTTCGTGGACGCCACTAGTGACGCGCACACACCGGACAGTGCCGACACGGCGCCGCCGCTCGCGCTCGTCAGCCACCGCGCCGAACAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGACGTGCGATTGCAGAACCTGGTGAGTTCGAAGCAGGCGCTGGAGTCTGAGGTGCGCAAGCTGAAGCTCACGCTCAACGAGGAGCGCGCCGCCAGGCAGAACGGCGTCGCCAACCACCACGACCACCACTACGAGACAGAGCTGGAGACCCTCCGCAAgtgcgtgtccgaggcgaagggtcgcgcggcccgcgcggaggcggaggcggcgctgcaggcggcggccacggcgcggctcgaggcgcagctgcagcgcctgcgcgcgcgccaggaccaccaggacgagcacgaggagctgctcaagcaggagaggcgccgcctgcagagagagGCCAGGGAGGCACTAAACAGAGTGGAGGAGTTGGAGACGGAAAACAGTCACCTGACGAAGAGGCTGGACAAGCTGAAGAACGCCAAGTCTGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDGDFGDSDEDVVERNDTNSHIPVNETVNQAVTTVNGNAALDDPSPDKSKINGRRISENHTEDEGITDVRRDSHEQIPSIVGILGNQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGGRLAALSPGGVHSPRRSSEDSVDDSFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREYREKCSAHERLKREHVSLEREVCAARGAVRARDAAAHAAGFAFVDATSDAHTPDSADTAPPLALVSHRAEQLLNDAGEGTLDVRLQNLVSSKQALESEVRKLKLTLNEERAARQNGVANHHDHHYETELETLRKCVSEAKGRAARAEAEAALQAAATARLEAQLQRLRARQDHQDEHEELLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01429956; iTF_00428143; iTF_00429032; iTF_00819184; iTF_00858565; iTF_01312241; iTF_01317311; iTF_00063611; iTF_01010376; iTF_00859488; iTF_00468191; iTF_00467422; iTF_01415859;
- 90% Identity
- iTF_00428143; iTF_01429956; iTF_00429032; iTF_00819184;
- 80% Identity
- -