Mtil005838.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_905332985.1
- Location
- HG995243.1:17794050-17814982[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-80 9.4e-76 255.4 24.1 1 297 114 401 114 403 0.89 2 2 1 2.4e+04 -8.6 16.7 1 44 400 443 400 475 0.66
Sequence Information
- Coding Sequence
- ATGGGGCAACGATCGGAAATGGCAACGCCTGACAACAGTGATGAAGAGAGCGGTGACGCGTTCACCGATGGAGATTTTGGAGATTCTGAGGAAGAAGTCGTCGAAAATAATGTCTCTAAATCTCACATACCAGTGAATGAAACTATCAACGAAGACGTGAAGGCAGTTAATGGTAATGATGCTATTGACGAACCGGGTCCAGAAAAGCCTAAAATGAATGGACGAAGGATGAGCGAGAACCAACCTAACGACGATCAAGGGATGGCAGAAGTGAGAAGAGATTCACACAGCGAACAGATCCCTTCCATAGTTGGGATACTTGGAAACCAACAAAATCACGCGGAACAGCGTTTGGCAGCGCGTCGAGCGGCGCGTGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGAGGCAGCAGCGTGAACAGGAAAACCATGCCGATAAAGCCTATGATATGTATGCAGAGACGGTGGGTCGTCGCGCCGGCGGGCGGCTGGCGGCGCTCAGTCCCGGTGGCGTGCACTCGCCGCGCCGCAGCTCCGAGGACTCCGTCGACGACAGTTTCAGCGTTAAGGACCTCAGGCACGAGTTAAAAGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATTCTCAACGCCCAACTGGACAACGACAAGGCGGCGCTCAGCTACCAGCTGGAACTGCTCAAAGACAGGATAGAGGAACTGCACGAAGAGTATGCACAGTTGCAGCGCGAACACAAAGAGAAATGCTCTGCACACGAGCGTCTGAAGCGCGAGCACGCTTCTTTAGAGCGTGAGGTGGAAGCAGCGCGGGGGGCTGTACGGGCGAGGGATGCCGCGGCGAATGCAGCGGGGTTCGCGTTCGTGGACGCCGCGGGGAGCGAGGGGGTCACGGGGGCGGGGGCGGGGGTGACGTCAGACGACACAGCCCCGCCTCTCGCGCTCGTGTCACACCGCGCCGAGCAGCTGCTCAACGATGCTGGAGAGGGCACATTAGATGTGCGATTGCAAAAGCTGGTTAGCTCGAAGCAGGCGCTGGAGTCAGAAGTCCGCAAGCTGAAGCTACAGCTGAACGAGGAACGCGCTGCAAGACAAAACGGCGTAGCAAACCATCACGATCATGAATATGAAGGCGAACTGGAAGCGCTCCGCAAGTCTGTTTCGGAGGCTAAAGCCCGTGCAGCACGTGCAGAGGCAGAGGCGGCGCTACAAGCGGCCGCGACTGCACGACTCGAGGCACAGCTGCAGAGACTGCGAGCGAGGCAGGACCATCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGCGACGCCGGCTGCAGCGGGAGGCAAGAGAAGCTCTAAACAGAGTCGAGGAGTTGGAGACAGAGAACAGTCACTTGACGAAGCGACTGGACAAGCTCAAGAACGCCAAGTCAGCGCTTCTCAAGGACCTGTGA
- Protein Sequence
- MGQRSEMATPDNSDEESGDAFTDGDFGDSEEEVVENNVSKSHIPVNETINEDVKAVNGNDAIDEPGPEKPKMNGRRMSENQPNDDQGMAEVRRDSHSEQIPSIVGILGNQQNHAEQRLAARRAARAEAREIRMRELERQQREQENHADKAYDMYAETVGRRAGGRLAALSPGGVHSPRRSSEDSVDDSFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALSYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHASLEREVEAARGAVRARDAAANAAGFAFVDAAGSEGVTGAGAGVTSDDTAPPLALVSHRAEQLLNDAGEGTLDVRLQKLVSSKQALESEVRKLKLQLNEERAARQNGVANHHDHEYEGELEALRKSVSEAKARAARAEAEAALQAAATARLEAQLQRLRARQDHQDEHEELLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820103;
- 90% Identity
- iTF_00858565;
- 80% Identity
- -