Htar002083.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Herminia tarsipennalis
Gene Symbol
bab1
Assembly
GCA_945859575.2
Location
OX243831.1:7064415-7077714[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-16 2.1e-14 54.0 0.0 1 43 54 97 54 99 0.95

Sequence Information

Coding Sequence
ATGATAGAAAATTCTCAAGCTTGGCTGGGCGCTTCCACATCGGCAGCAATTGCAGATAGCTACCAATACCAACTACAGTCGATGTGGCAGAAGTGCTGGAACACACAGACGCTCGTCCACAACCTACGCTTCAGGGAGCGCGGCCCCCTTAAGTCCTGGCGGCCGGAGACAATGGCCGAGGCAATCTTCTCCGTGCTTAAAGAAGGACTATCATTGTCCCAAGCTGCCAGAAAATATGATATACCGTACCCAACGTTCGTGCTCTACGCCAACAGAGTCCACAACATGCTGGGACCCAGCGCCGATGGCGGTGCAGATTTAAGACCAAAGGGGAGGGGACGGCCGCAAAGGATCTTACTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTGATCCGCGCCGTCGTGTTCAGGGACACGCATGCGCCCTGCGCCCCGCAGGCCACCAACCTGAAGGAGCTGGAGCTGCCGGGCTACCCCGCCATCGCACCGGACGGCGTGGCCGTACAGAACGCTTACATCGGATGTGGCAATGGGCGCGAGGGGCGCATGTCGCCCAACGCCGCGGCCGCCGCTGCCGTGGCCGCCGTGGCGCACGGCTTGCGCCGGCAGATGTGCAACATGGTCGCGGGCCAGCGCGGCCCCGAGCACCCGCCGCATCTCGGCCCGCCGCTGCAGTCCTCGCCGCAGCTCACTTCGCCGCTCTCCACGGGGCTGGAGTCGCCGCTGTGCTCGCCACCGCCGCCCGGCCACGCGCTGGAGCCGCCCAAGCACGCCGATCCGTTCCGCCCGTTTGCTTCCCCGACCGATAGCCGCTACGGCGACCGCGACACCTCCTCGGACATCACTGAGATGGGACCGCCCAAAAACGGGCAGGGCATAGCGCGCAAGGCGCCGGGCCAGGGCACTTCTCCCTCCGAGCTGGAGCACGCGGCCGACGCCCGCGCGGACATCTGA
Protein Sequence
MIENSQAWLGASTSAAIADSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPCAPQATNLKELELPGYPAIAPDGVAVQNAYIGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNMVAGQRGPEHPPHLGPPLQSSPQLTSPLSTGLESPLCSPPPPGHALEPPKHADPFRPFASPTDSRYGDRDTSSDITEMGPPKNGQGIARKAPGQGTSPSELEHAADARADI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01425864;
90% Identity
iTF_01092993; iTF_01093956; iTF_01094821; iTF_00037698; iTF_00302022; iTF_01085060; iTF_01119238; iTF_01118191; iTF_01117113; iTF_00111546; iTF_00888153; iTF_01025953; iTF_00951714; iTF_00851690; iTF_01030122; iTF_00850544; iTF_01230449; iTF_00973683; iTF_01029140; iTF_00771798; iTF_01028186; iTF_00300095; iTF_00785927; iTF_00171681; iTF_01538658; iTF_00785128; iTF_00072105; iTF_00186062; iTF_00017264; iTF_00185234; iTF_00018099; iTF_00677461; iTF_00783350; iTF_00450041; iTF_01076313; iTF_01285465; iTF_00383546; iTF_00784318; iTF_01260030; iTF_01264320; iTF_00908740; iTF_00821703; iTF_00404626; iTF_00636194; iTF_00637418; iTF_01166520; iTF_01425864; iTF_00121322; iTF_00447041; iTF_00124164; iTF_00041701; iTF_00301093; iTF_00622725; iTF_00685349; iTF_00809029; iTF_00711750; iTF_00924518; iTF_01439815; iTF_00726216; iTF_00928584; iTF_01062728; iTF_01339944; iTF_00040713; iTF_01063689; iTF_00122282; iTF_01338506; iTF_00172651; iTF_00758059; iTF_00448940; iTF_00745548; iTF_00373837; iTF_00446029; iTF_01084173; iTF_01064558; iTF_01440910; iTF_01061807; iTF_01531888; iTF_00043409; iTF_00147218; iTF_00425298; iTF_01532946; iTF_00042547; iTF_00906035; iTF_00831093; iTF_00907800; iTF_00375098; iTF_00906972; iTF_00273533; iTF_01534717; iTF_00039711; iTF_00274367; iTF_00809983; iTF_01361510; iTF_01362383; iTF_00177034; iTF_01221418; iTF_00327009; iTF_00000237; iTF_00001102; iTF_01342138; iTF_00049824; iTF_00363946; iTF_01526941; iTF_01525856; iTF_00445034; iTF_00123275; iTF_00237387; iTF_00345742; iTF_00706862; iTF_00869547; iTF_01435980; iTF_00282190; iTF_01332471; iTF_01502011; iTF_01151996; iTF_01491804; iTF_00281054; iTF_00823841; iTF_00157129; iTF_00441417; iTF_01197646; iTF_00822832; iTF_01424968; iTF_01360543; iTF_00709108; iTF_00931139; iTF_00932331; iTF_00889102; iTF_00120407; iTF_01246745; iTF_00038622; iTF_00036544;
80% Identity
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