Hvir003524.1
Basic Information
- Insect
- Heliothis virescens
- Gene Symbol
- bab1
- Assembly
- GCA_002382865.1
- Location
- NWSH01000126.1:186274-220025[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 9.9e-15 53.7 0.0 1 43 99 142 99 144 0.95 2 2 2.1 1.2e+03 -0.9 0.5 6 15 236 245 226 246 0.82
Sequence Information
- Coding Sequence
- ATGCGGTTGAAATTAGATGAGAGCcggttttatatttgttttttttttttaatttcctattGTCTGTTTAAATACAATATAGTCGTGATGTTAAATACGTTTAGACCTAATGTTGTTTTTTGTCCACAGGCCAAGATGATTGAAAACTCCCAGGCCTGGCTTGGAGCATCCACATCGGCAGCAATTGCTGATAGCTACCAATACCAACTCCAGTCGATGTGGCAGAAGTGTTGGAACACGCAGACGCTGGTGCACAACCTGAGATTCCGAGAGCGCGGCCCGCTCAAGTCCTGGCGACCAGAGACCATGGCAGAGGCTATCTTCTCCGTGCTGAAGGAAGGACTGTCCCTGTCCCAGGCAGCTCGAAAATACGATATACCGTACCCGACGTTCGTGTTGTACGCGAACAGGGTGCACAACATGCTGGGCCCCAGCGCTGACGGCGGTGCAGATTTAAGACCAAAGGGGAGGGGGCGGCCACAAAGGATCTTACTGGGCGTTTGGCCCGACGAGCACATTCGCGGCGTTATTCGCGCAGTAGTGTTCAGAGACACCCACGCACCCTGCGCCACTCAGGCCACAAACCTTAAAGAGATCGAACTGCCGGGCTACCCTGCCATCGCACCGGACGGAGTGGCCGTTCAGAACGCTTACATCGGGTGCGGCAACGGGCGCGAGGGCCGCATGTCGCCcaacgccgccgccgccgccgctgtggCCGCCGTAGCGCACGGCCTGCGCCGGCAGATGTGCAACATGGTGGCGGGCCAGCGGCCCCCGGACCACCCGCCGCACCTGGGCCCGCCCATGCAGAGCTCGCCGCAGCTCACCTCGCCGCTCTCCACCGGACTAGAGTCCCCGCTGTGCTCGCCCCCGCCACCCGGCCATGCGCTCGAGCCCGCCAAGCACACCGACCCGTTCCGCCCCTTCGCTTCACCGACTGATAGCCGCTACAGCGACCGCGACACTTCTTCCGACATCACTCTGATGGGACCGCCGAAGAACGGCCAGGGCCACATAAGGAAGGGCTCCGGCCAAGGCTCGTCGCCCTCCGAGCTGGACGCGGCGGACGGGCGCGCGGACATCTGA
- Protein Sequence
- MRLKLDESRFYICFFFLISYCLFKYNIVVMLNTFRPNVVFCPQAKMIENSQAWLGASTSAAIADSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPCATQATNLKEIELPGYPAIAPDGVAVQNAYIGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNMVAGQRPPDHPPHLGPPMQSSPQLTSPLSTGLESPLCSPPPPGHALEPAKHTDPFRPFASPTDSRYSDRDTSSDITLMGPPKNGQGHIRKGSGQGSSPSELDAADGRADI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00794266;
- 80% Identity
- -