Pfes001418.2
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- bab1
- Assembly
- GCA_950381575.1
- Location
- OX494430.1:20097798-20103197[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-17 1.7e-14 53.9 0.0 1 43 69 112 69 114 0.95 2 2 5.8 1.8e+03 -0.6 0.4 6 15 206 215 195 216 0.79
Sequence Information
- Coding Sequence
- ATGTTTGGGGTATTAGTAGCGTTTCAAATTCGCGCGCTTGAGCAGCGCCGTTCGTTGAACGCGTCCTATTCGCGCGGCGCGGTCGAAGCGCGCGCCGCTCATAGCTACCAATACCAGCTGCAGTCGATGTGGCAGAAGTGCTGGAATACGCAGACTCTGGTTCACAACCTGAGATTCCGCGAGCGCGGTCCGCTCAAGTCCTGGCGGCCGGAGACCATGGCCGAGGCGATCTTCTCCGTGCTCAAGGAGGGGCTGTCCCTCTCGCAGGCGGCCAGGAAATATGACATACCGTATCCGACTTTCGTCCTGTACGCCAACAGGGTGCACAACATGCTTGGCCCGAGCGCAGATGGCGGCGCAGATTTAAGACCAAAGGGAAGGGGACGGCCGCAAAGAATCTTACTGGGCGTATGGCCCGACGAGCACATCCGTGGCGTAATCCGCGCTGTAGTGTTCAGAGACACCCACGCGCCCTGCGCCACACAAGCCACCAACCTTAAAGAGCTGGAACTGCCGGTCTACCCCGCCATCGCACCGGACGGTGTGGCCGTTCAGAACGCGTACATCGGGTGCGGCAATGGGCGCGAGGGGCGCATGTCGCCCAACGCCGCAGCCGCCGCTGCCGTGGCCGCCGTGGCGCACGGGCTGCGCCGCCAGATGTGCAACATGGTGGCGGGGCAACGGCCACCCGACCACCCGCCGCACCTGGGTCCGCCCATGCAGTCCTCGCCGCAGCTCACCTCGCCGCTTTCCACCGGGCTAGAGTCCCCGCTGtgctcgccgccgccgccgggccACGCGCTCGAGCCCGCCAAGCATCCCGACCCATTCCGCCCCTTCGCTTCACCGACCGATAGTCGCTACGGAGACCGCGATACTTCCTCGGAAATCACTGAAATGGGACCGCCCAAGAATGGCCAGGGCCTCATCCGGAAGGTACCGGGCCAGGGCTCGTCACCCTCTGAGCTGGACGCGGTAGACGGGCGCGCGGACATCTGA
- Protein Sequence
- MFGVLVAFQIRALEQRRSLNASYSRGAVEARAAHSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPCATQATNLKELELPVYPAIAPDGVAVQNAYIGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNMVAGQRPPDHPPHLGPPMQSSPQLTSPLSTGLESPLCSPPPPGHALEPAKHPDPFRPFASPTDSRYGDRDTSSEITEMGPPKNGQGLIRKVPGQGSSPSELDAVDGRADI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00794266;
- 80% Identity
- -