Lmon001002.2
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- bab1
- Assembly
- GCA_905163515.1
- Location
- LR991081.1:28668306-28681314[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-17 2.3e-14 54.0 0.0 1 43 51 94 51 96 0.95 2 2 9.2 2.2e+03 -0.4 0.3 6 15 188 197 177 199 0.80
Sequence Information
- Coding Sequence
- ATGAACAATTTATCGATCATGATTGAGTTCTCCAATTATAATGCATATAGCTACCAATACCAACTGCAGTCAATGTGGCAAAAGTGTTGGAACACTCAGACCCTCGTCCACAACCTGCGCTTTAGGGAACGCGGACCGCTGAAATCCTGGCGACCAGAAACCATGGCGGAGGCAATTTTCTCCGTGCTCAAGGAAGGACTATCGCTGTCTCAAGCGGCCAGAAAATATGATATACCATACCCGACGTTTGTGCTGTATGCCAATAGGGTCCACAACATGCTTGGACCCAGTGCTGACGGCGGTGCAGATTTAAGACCAAAGGGAAGGGGACGGCCTCAGAGGATCTTACTGGGTGTCTGGCCTGACGAACATATCCGCGGAGTGATACGCGCGGTCGTGTTCAGAGACACACATGTGCCGTGCACCCCACAACCTACAGGCCTGAAGGAGCTTGAACTGCCAGGCTACCCTCCCATCGCAACGGACGGCATCGCAGTTCAGAACGCTTACATAGGCTGTGGAAACGGTCGCGAGGGCCGTATGTCGCCaaacgccgcagccgcggctgctGTGGCTGCCGTAGCCCATGGTCTACGCCGTCAGATGTGCAATATGGTGGCCGGCCAGCGTGGACCAGAGCATCCTTCACATCTCGGCCCACCAATGCAGCCATCGCCACAACTAACATCACCACTATCTACTGGTCTGGAATCGCCGCTGTGCTCACCGCCGCCACCCGGACATGCGCTCGAGCCACCCAAACATGTCGATCCTTTCCGCCCGTTTGTTTCCCCGACTGACAGTCGTTACGGCGATCGCGATACTTCCTCTGATATGACTGACATGGGACCGCCCAAAAACGGACAGGGCATCATCCGCAAGGCCCCTGGCCAGGGTGCCTCCCCCGAGATGGATCACGGGGCTGATGGTAGAGCGGATATCTGA
- Protein Sequence
- MNNLSIMIEFSNYNAYSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHVPCTPQPTGLKELELPGYPPIATDGIAVQNAYIGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNMVAGQRGPEHPSHLGPPMQPSPQLTSPLSTGLESPLCSPPPPGHALEPPKHVDPFRPFVSPTDSRYGDRDTSSDMTDMGPPKNGQGIIRKAPGQGASPEMDHGADGRADI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00794266;
- 80% Identity
- -