Aanc000265.2
Basic Information
- Insect
- Apamea anceps
- Gene Symbol
- bab1
- Assembly
- GCA_951799955.1
- Location
- OX637500.1:2770509-2783436[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-17 2.1e-14 53.8 0.0 1 43 84 127 84 129 0.95 2 2 4.7 2.1e+03 -0.7 0.4 6 15 221 230 210 231 0.79
Sequence Information
- Coding Sequence
- ATGGAGAAACTAAAGAAAATCGTGACGTACTTCATGGACAACCAAACACCGATGGCCGATATCAAAAGATGTTACAATGCGAATATAGGACCGTTAAGATGTCGGTCGTTTGCGCTCACCCTAACTTGTTTAGTAACGAGTCATGATAGCTACCAATACCAGCTCCAGTCGATGTGGCAGAAGTGCTGGAACACGCAGACTTTGGTGCACAACCTAAGATTCCGTGAGCGTGGACCACTCAAATCCTGGCGGCCAGAGACTATGGCCGAGGCCATCTTCTCCGTGCTGAAGGAAGGACTTTCCCTGTCACAGGCAGCCCGAAAATACGATATTCCGTACCCGACGTTCGTCCTGTACGCCAACCGAGTCCACAACATGCTGGGCCCCAGCGCGGACGGCGGCGCAGATTTAAGACCAAAGGGAAGGGGGCGGCCACAGAGGATCTTACTGGGCGTTTGGCCCGACGAGCACATCCGCGGCGTTATCCGCGCGGTCGTGTTCAGAGACACGCACGCGCCCTGCCCGCCCCCGGCCACCAACCTTAAAGAGATCGAACTGCCGGGCTACCCTGCCATCGCACCGGACGGTGTGGCCGTTCAGAACGCTTACATCGGGTGTGGCAACGGACGCGAGGGCCGCATGTCGCCCAACGCCGCGGCCGCCGCTGCCGTGGCCGCCGTGGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTGGCCGGCCAGCGCCCCCCAGACCACCcgccgcacctgggcccccccatgCAGTCGTCACCGCAGCTCACGTCACCGCTGTCCACCGGGCTGGAGTCACCGCTGTGCTCGCCCCCGCCGCCCGGCCACGCGCTGGAGCCCGCCAAGCACCCGGACCCGTTCCGCCCCTTCGCCTCACCGACTGAAAGCCGCTACGGCGACCGCGATACATCCTCCGATATCACGCTCATGGGACCGCCAAAGAATGGTCAGCAGGGCCACGCCAGGAAGGGCGCCGGTCAAGGCTCGTCGCCCTCCGAGCTGGATGCGAGCGACGGGCGCGCGGACATCTGA
- Protein Sequence
- MEKLKKIVTYFMDNQTPMADIKRCYNANIGPLRCRSFALTLTCLVTSHDSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPCPPPATNLKEIELPGYPAIAPDGVAVQNAYIGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNMVAGQRPPDHPPHLGPPMQSSPQLTSPLSTGLESPLCSPPPPGHALEPAKHPDPFRPFASPTESRYGDRDTSSDITLMGPPKNGQQGHARKGAGQGSSPSELDASDGRADI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00794266;
- 80% Identity
- iTF_00122282;