Hcun015844.1
Basic Information
- Insect
- Hyphantria cunea
- Gene Symbol
- bab1
- Assembly
- GCA_003709505.1
- Location
- PKRV01001717.1:176223-275682[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-18 1e-14 54.0 0.0 1 43 54 97 54 99 0.95 2 2 0.5 9.2e+02 -0.3 0.3 6 15 191 200 180 203 0.79
Sequence Information
- Coding Sequence
- ATGATTGAGAATTCCCAAGCCTGGCTGGGCGCTTCGACATCTGCAGCAATCGCAGATAGCTACCAATACCAACTGCAGTCGATGTGGCAAAAGTGCTGGAACACGCAGACCCTCGTCCACAACCTGCGCTTCAGGGAACGCGGACCGCTCAAGTCCTGGCGTCCAGAGACAATGGCTGAGGCCATTTTCTCAGTGCTTAAGGAGGGACTATCACTATCTCAGGCGGCCAGAAAATATGATATACCGTATCCGACATTCGTGCTCTACGCCAACAGAGTCCACAACATGCTGGGCCCCAGCGCCGATGGCGGTGCAGATTTAAGACCAAAGGGAAGGGGACGACCGCAAAGGATCTTACTGGGCGTTTGGCCCGACGAGCACATTCGTGGAGTAATCCGTGCAGTGGTGTTCAGAGACACCCACGCGGCCTGCGCCGCGCAGGCCACCAACCTGAAGGAGCTGGAGCTGCCGGGCTACCCGCCCATCGCACCGGACGGTGTCGCCGTACAAAACGCTTACATCGGATGTGGCAACGGGCGCGAAGGACGTATGTCACCCAACGCTGCGGCTGCTGCAGCCGTTGCTGCCGTGGCCCACGGCATTCGCCGCCAAATGTGCAACATGGTAGCCGGCCAGCGGGGACCCGAGCATCCTCAGCACCTCGGTCCCCCCATGCAGCCATCGCCTCAACTCACTTCACCCCTTTCCACTGGGTTGGAATCGCCGTTATGCTCACCACCGCCACCCGGCCACGCGCTGGAACCGCCAAAGCACGCCGATCCGTTTCGTCCATTCGCCTCACCGACCGACAGCCGCTACGGAGACCGCGACACCTCCTCGGACATCACTGAGATGGGCCCGCCTAAGAACGGGCAAGGCATCGCTCGCAAGGCGCCTGGCCAAGGTACCTCTCCCTCAGAGCTGGAGCACGCGGCTGACGCGCGTGCGGACATCTGA
- Protein Sequence
- MIENSQAWLGASTSAAIADSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAACAAQATNLKELELPGYPPIAPDGVAVQNAYIGCGNGREGRMSPNAAAAAAVAAVAHGIRRQMCNMVAGQRGPEHPQHLGPPMQPSPQLTSPLSTGLESPLCSPPPPGHALEPPKHADPFRPFASPTDSRYGDRDTSSDITEMGPPKNGQGIARKAPGQGTSPSELEHAADARADI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00794266;
- 80% Identity
- -