Ccur029382.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- bab1
- Assembly
- GCA_905475355.1
- Location
- FR997794.1:2061497-2076132[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 2.1e-14 53.9 0.0 1 43 71 114 71 116 0.95 2 2 1.7 2.7e+03 -0.8 0.4 6 15 208 217 198 219 0.84
Sequence Information
- Coding Sequence
- ATGCATCGGGACGTTTCAACCGGTACTTACGCCACGTGTGCAACGGCTAAAATGATCGAGAATTCGCAGGCCTGGCTTGGCGCATCTACCTCTGCTGCAATTGCAGATAGCTACCAATACCAGCTGCAATCCATGTGGCAGAAGTGCTGGAACACTCAGACACTGGTGCACAACCTGCGTTTCCGCGAGCGTGGCCCCCTCAAGTCCTGGAGGCCTGAGACCATGGCTGAGGCGATTTTCTCCGTACTGAAGGAAGGCTTGTCACTCTCCCAAGCTGCGAGGAAATACGATATCCCATATCCGACATTCGTTCTGTACGCGAACCGAGTTCACAATATGCTCGGACCCAGCGCCGACGGAGGAGCAGATTTAAGACCAAAGGGAAGGGGACGACCGCAACGGATCTTACTGGGCGTTTGGCCCGACGAGCACATCCGCGGCGTGATCCGCGCCGTAGTGTTCAGGGACACGCACGCGCCCTGCCCCGCGCAGCCGACCAACCTAAAAGAGATCGAGCTGCCAGGCTACCCGCCTATCCCACCGGACGGCGTGGGCGTCCAGAACGCGTACATCGGGTGCGGCAACGGGCGCGAGGGCCGCATGTCGCCGAGCGCGGCCGCCGCAGCCGCAGTGGCGGCCGTGGCCCACGGGCTGCGCCGCCAGATGTGCGGCATGGGTGCGCCGCGGGCCGACCACCCACACCTGGGCCCGCCACTGCAGCCATCGCCGCAGCTCACGTCGCCGCTGTCCACTGGCCTGGAGTCTCCGCTGTGCTCGCCGCCGCCGCCCGGCCACGCCCTCGAGCCGGCCAAGCACGCGGACCCCTTCCGCCCCTTCGCTTCCCCCACGGACGCCCGCTACGGCGACCGCGACACCACGGCTGAAATTACCGACATGGGTCCGCCGAAAAACGGCCAGGGCATGACCAGGAAGGCGCCCGTGCAGGGCTCGCCCTCCGAGCTGGAGCACGCGGCCGAGGGCCGCGCGGACATCTGA
- Protein Sequence
- MHRDVSTGTYATCATAKMIENSQAWLGASTSAAIADSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPCPAQPTNLKEIELPGYPPIPPDGVGVQNAYIGCGNGREGRMSPSAAAAAAVAAVAHGLRRQMCGMGAPRADHPHLGPPLQPSPQLTSPLSTGLESPLCSPPPPGHALEPAKHADPFRPFASPTDARYGDRDTTAEITDMGPPKNGQGMTRKAPVQGSPSELEHAAEGRADI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00794266;
- 80% Identity
- -