Hpro003404.1
Basic Information
- Insect
- Hypena proboscidalis
- Gene Symbol
- bab1
- Assembly
- GCA_905147285.1
- Location
- LR990126.1:22952243-22973333[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-17 3.1e-14 53.5 0.0 1 43 139 182 139 184 0.95 2 2 6 3.5e+03 -1.1 0.5 6 15 276 285 266 286 0.82
Sequence Information
- Coding Sequence
- ATGAAGGCGGTTATTGTTCTTTCAGTAACAATAAGAGGAGCATTTTTCCACAATCGACTGAGGCCATTTCGAGTGAGAGGAGTGGAAATAATAACCACTGGATACCGCATCGACGCACGTTTAAACAATCAAACGGGGAACAAAAAGACAGTAATGTGGAAATGGATAATGCAGAAGCGGCTGTGGTGGTGTACGGCCGCACCGACAGCGGGCGCTCGCAGCGGCGCTTCTGTGCTCACTTGCTCTTTGGCGAAAATGATTGAGAACTCCCAGGCCTGGCTTGGAGCCTCCACATCGGCAGCTATTGCAGATAGCTACCAATACCAGCTGCAGTCCATGTGGCAGAAATGCTGGAACACCCAGACGCTGGTCCACAACCTACGCTTCAGGGAGCGCGGGCCGCTCAAGTCTTGGCGCCCGGAGACCATGGCCGAAGCCATCTTCTCTGTGCTGAAGGAAGGACTATCCCTCTCCCAGGCAGCCAGGAAATATGACATCCCTTACCCAACCTTCGTGCTGTACGCCAACCGAGTCCACAACATGCTTGGCCCGAGCGCGGATGGCGGAGCAGATTTAAGACCAAAAGGAAGGGGCCGCCCACAAAGAATCTTGCTGGGCGTTTGGCCCGACGACCACATCCGTGGCGTGATCCGCGCCGTAGTCTTCAGAGACACGCACGCGCCCTGCCCTACACCGCCCACCAACCTCAAGGAGCTGGAGCTGCCGGGCTACCCCGCCATCACACCGGACGGCGTGGCCGTACAGAACTCCTACATCGGATGCGGCAACGGGCGCGAGGGCCGCATGTCGCCGAACGCGGCCGCCGCTGCAGCCGTGGCCGCCGTTGCGCACGGGCTCCGGCGCCAGATGTGCAACATGGTGTCGGGTCAGCGCGGCCCGGAGCACGCGCCTCACCTGGGCCCGCCGCTGCAGTCCTCACCGCAGCTGACATCGCCGCTGTCCTCGGGGCTGGAGTCCCCGCTGTGCTCACCGCCACCACCCGGTCACGCCCTCGAGCCGCCCAAGCATGCAGACCCGTTCCGCCCCTTTGCCTCTCCGACCGACAGCCGCTACGGCGACCGCGACACATCCTCAGACATCACCGACATGGGCCCCCCGAAGAACGGGCAGGGCATCGCGCGCAAGGCTCCCGGCCAGGGCGTCTCGCCCTCCGAGCTGGAGCACGCGGCGGACGCGCGTGCGGATATCTGA
- Protein Sequence
- MKAVIVLSVTIRGAFFHNRLRPFRVRGVEIITTGYRIDARLNNQTGNKKTVMWKWIMQKRLWWCTAAPTAGARSGASVLTCSLAKMIENSQAWLGASTSAAIADSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRDTHAPCPTPPTNLKELELPGYPAITPDGVAVQNSYIGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNMVSGQRGPEHAPHLGPPLQSSPQLTSPLSSGLESPLCSPPPPGHALEPPKHADPFRPFASPTDSRYGDRDTSSDITDMGPPKNGQGIARKAPGQGVSPSELEHAADARADI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00794266;
- 80% Identity
- -