Ecan039186.2
Basic Information
- Insect
- Eilema caniola
- Gene Symbol
- retn
- Assembly
- GCA_949126895.1
- Location
- OX421478.1:10875016-10885128[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-20 4.1e-16 60.9 0.0 16 89 15 86 10 86 0.94 2 2 6.8 3.2e+04 -2.9 0.0 25 38 217 230 181 233 0.67
Sequence Information
- Coding Sequence
- ATGATTAAGTGCAGACAGGAAGACGGATTGACAAATAGTCGTTTAGGAACACCGATAAACAGATTGCCAATAATGGCCAAGTCCGTCCTGGACTTGTATGAACTGTATAACTTAGTGATTGCCCGCGGAGGCCTGGTCGAGGTGATTAACAAGAAACTCTGGCAGGAGATTATCAAGGGATTGAGACTGCCTTCATCCATCACTTCAGCGGCTTTCACATTACGTACACAGTATATGAAGTACTTGTACGACTATGAGTGCGAGAAGAAGAATCTGTCGACTCGGAGTGAGCTGGACGCCGCCATTGAAGGCAACAAACGTGAAGGCAGACGCGCTTCTGGACAGTATGACGCACAAGCAGCTTTAGCAATGCCGCCTCTGAACCGTGGCGTGCCTGCCTCACTAGCACAGCTCTCCCAGCACATGCAGCCTCTCTCCCTCTCGCTCGGAGGAGTGGCGCCACGCCTCCCGCCGATGCCGCCACACGCGCCACATCTAGCGGCGCAACATGACATCGAGTACAGGGTCCGGGAGTACGTGAAAATGCTCCAGCAACAGAGAGATCTCATGAGAAATGGTTCAGAGTCACCGCCGAGCATGAGCGGTCCGGCGCCCATCATGTCTCCACGAGATGCGGCCACGCTTAGCGCTATCGATGTGTCGCGCCTCACGCTCTGGTCGCTGTACAATAACAACAATAGCAGTCCACAGCCTGAAATAGAACCACAGCGCGAGGCACTAAACCTGAGCGAGAGCCCCAACTCTAGCACATCTGGGGGCAAGCGCGAGGCGTGCAGATCGCCGCCACCCCCTGCCAAACGCCGCACGCCCCGGCCTGCCTCGCCACGCGCCTCACCACCATCGCCGCCACCGTCAGCATCGATGTCCCGTGCCAACAGACTTGATCCTCCATCACCGTCTCACGCACACAACGGGCCCACTTCTAATGGAGTTAATGGGGCAGCTTTCAAGATTACTACCAGAGGTGACGCCAGCACAGGCGACCAGCAGCTGGTAGTGTCAATAGAGTTGAATGGTGTGACGTACGAAGGCGTTCTCTTCCCTTCCAATAATTCACAGAACGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MIKCRQEDGLTNSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPMPPHAPHLAAQHDIEYRVREYVKMLQQQRDLMRNGSESPPSMSGPAPIMSPRDAATLSAIDVSRLTLWSLYNNNNSSPQPEIEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPASPRASPPSPPPSASMSRANRLDPPSPSHAHNGPTSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSNNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01166373; iTF_01151845; iTF_01491660; iTF_00888975; iTF_00280915; iTF_00908596; iTF_00821559; iTF_00425153; iTF_00449907; iTF_00699883; iTF_01180111; iTF_00204917; iTF_01179287; iTF_00931005; iTF_00794105; iTF_00404477; iTF_01332329; iTF_00869406;
- 90% Identity
- iTF_00677326;
- 80% Identity
- -