Emi039939.1
Basic Information
- Insect
- Euclidia mi
- Gene Symbol
- retn
- Assembly
- GCA_944738845.2
- Location
- CALYKX020000393.1:2703663-2709064[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-19 6.8e-16 60.6 0.0 16 89 13 84 7 84 0.95
Sequence Information
- Coding Sequence
- ATGTTTTCCTTAGATTCTAATCTGCCTTCAATTGTTACAGGAACGCCAATCAATCGGTTGCCGATCATGGCGAAGTCTGTGCTCGACCTTTACGAGCTGTACAACCTGGTGATCGCCCGCGGCGGGCTCGTCGAGGTCATCAATAAGAAGCTCTGGCAGGAGATCATCAAGGGACTCCGATTGCCCTCGTCCATCACTTCAGCTGCTTTCACGTTACGTACACAATACATGAAGTACCTGTACGATTACGAGTGTGAGAAGAAAAACCTGTCAACTCGGAGTGAGTTAGACGCCGCCATAGAAGGAAACAAGCGAGAGGGCAGACGGGCTTCAGGACAGTATGACGCGCAGGCTGCATTGGCAATGCCGCCTCTGAACCGTGGCGTGCCGGCGTCGCTCGCGCAGCTGTCTCAACACATGCAGCCTCTGTCTCTTTCCCTCGGCGGAGTAGCACCTCGCCTACCGCCGCTACCGCCGCACGCACCGCACCTCGCGCAGCACGACATCGAGTACAGGGTGCGGGAGTACATGAAGATGATACAGCAGCAGCGGGAGCTCATGAGGAACGGTTCCGAGTCCCCGCCAGGCGTGAACGGCCCAGCGCCCATAATGTCCCCGCGCGACGCCGCGGCTCTCAGCGCCATCGACGTGTCCCGCCTCACGCTGTGGTCGCTCTACAACAATAACAACAACAACAGCCCGCAGCCGGACCTCGAGCCGCAGCGCGAGGCACTAAACCTGAGCGAGAGTCCGAACTCTAGCACGTCGGGCGGCAAGCGGGAGGGCTGTCGGTCGCCGGCGCCGCCAGCTAAACGCCGCACGCCGCGTCCTGCCTCGCCGCGCGCCTCGCCTCGCGTGTCGCCTCGCGCCTCGCCGCCCGACGCCGCGCTGGCGCCGGCCGCGCGCGCCTCGCGCCTCGACGCCGCCTCGCCGCCGCACGCCATCAACGGACCTAACGCCAACGGTGTCAATGGCGCCGCCTTCAAGATCACCACCAGAGGCGACGCGAGCACAGGTGACCAGCAGCTCGTTGTGTCAATAGAACTCAACGGTGTGACGTACGAGGGCGTCCTCTTCCCAGCCAACAACTCACAGAACGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MFSLDSNLPSIVTGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPGVNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREGCRSPAPPAKRRTPRPASPRASPRVSPRASPPDAALAPAARASRLDAASPPHAINGPNANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPANNSQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01151845; iTF_00280915; iTF_00794105; iTF_00282051; iTF_01332329; iTF_01491660; iTF_01501870; iTF_00888975; iTF_00821559; iTF_00869406; iTF_00404477; iTF_00636054;
- 80% Identity
- -