Ldis024004.2
Basic Information
- Insect
- Lymantria dispar
- Gene Symbol
- retn
- Assembly
- GCA_032191425.1
- Location
- CM063455.1:21694906-21707312[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-20 3.2e-16 60.9 0.0 16 89 12 83 3 83 0.93 2 2 3.5 1.7e+04 -2.3 0.0 25 37 213 225 173 227 0.46
Sequence Information
- Coding Sequence
- ATGAGCGACCTGGAGACGAGCGCCATGTCCTTTTATGGCACACCTATCAACCGGCTGCCGATAATGGCTAAGTCTGTCCTAGATCTCTATGAGTTGTACAACTTAGTAATCGCTCGTGGTGGACTCGTCGAAGTAATCAATAAGAAGCTTTGGCAAGAAATAATTAAAGGCTTGAGACTGCCATCATCTATTACATCAGCTGCGTTCACTCTACGTACACAATATATGAAATATTTGTACGATTATGAATGCGAGAAAAAGAATCTATCAACTCGGAATGAGCTGGACGCTGCTATAGAAGGCAACAAGCGTGAAGGAAGACGTGCTTCTGGACAATATGATGCACAAGCTGCCTTAGCTATGCCGCAATTGAATCGCGGAGTGCCAGCTTCCTTGGCGCAGTTATCACAGCACATGCAACCGTTGTCATTGTCACTTGGAGGTGTTGCGCCACGTCTTCCGCCGTTACCGCCCCACGGACCACATCTCGCTCAACATGACATCGAATACAGAGTACGCGAATATATGAAAATGTTACAACAACAAAGAGAACTTATGAGAAATGGTTCTGAATCTCCTCCAAATGTGAATGGTCCAGCGACGATCATGTCGCCCCGTGATGCAGCTGCTCTCAGCGCCATAGATGTATCTCGTCTAACATTATGGTCTCTatacaataacaataataacagcAGTCCACAACCTGATCTCGAGCCTCAGAGAGAGGCATTAAACCTGAGCGAGAGCCCGAACTCTAGCACGTGTGGGATTAAGCGTGAGGCCTGCAGATCACCACCGCTGCCAGCTAAGCGGCGCAGTTCACGGCCAACCACACCCCGCGCTTCACCACCTTCCCCACCACTACCAGCACCAATCCCACGCACCAGGCTCAACGAAGCAACATCACCGTCACCGCCTACAGTCAACGGCGTCAATGGCGCCGCATTCAAAATAACCACCAGagGTGATGCCAGCACAGGCGATCAGCAGCTAGTGGTGACCATAGAACTGAACGGCGTAATATATGAAGGTGTACTCTTTCCCGCTAATCGAAATGGTCACAGGAAATAG
- Protein Sequence
- MSDLETSAMSFYGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALAMPQLNRGVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHGPHLAQHDIEYRVREYMKMLQQQRELMRNGSESPPNVNGPATIMSPRDAAALSAIDVSRLTLWSLYNNNNNSSPQPDLEPQREALNLSESPNSSTCGIKREACRSPPLPAKRRSSRPTTPRASPPSPPLPAPIPRTRLNEATSPSPPTVNGVNGAAFKITTRGDASTGDQQLVVTIELNGVIYEGVLFPANRNGHRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00932200;
- 80% Identity
- -